Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_K09
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme...    83   2e-16
Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical pr...    64   9e-11
Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical pr...    50   1e-06
AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical ...    39   0.004
U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a...    38   0.009
Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical pr...    37   0.012
U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical pr...    34   0.083
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    32   0.44 
U58755-1|AAB00691.3|  403|Caenorhabditis elegans Nematode astaci...    28   7.2  

>AF003140-9|AAB54171.1|   86|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 1 protein.
          Length = 86

 Score = 83.0 bits (196), Expect = 2e-16
 Identities = 40/74 (54%), Positives = 52/74 (70%)
 Frame = -2

Query: 687 KNLXALPTYAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQK 508
           K L   P+  +LL LYA FKQ TVGD +  ++PG+ DLKGKAK+ AW +  G +K+DAQK
Sbjct: 13  KTLKTSPSNDELLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGLAKDDAQK 71

Query: 507 AYIEIVEGLIASIG 466
           AY+ +VE LIA  G
Sbjct: 72  AYVALVEELIAKYG 85


>Z46794-8|CAA86779.1|  385|Caenorhabditis elegans Hypothetical
           protein R06F6.9 protein.
          Length = 385

 Score = 64.1 bits (149), Expect = 9e-11
 Identities = 31/71 (43%), Positives = 44/71 (61%)
 Frame = -2

Query: 687 KNLXALPTYAQLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQK 508
           K L   P     L LY  FKQAT GD     RPG++D  G+AK+DAW+ L G ++++A+ 
Sbjct: 37  KTLKEEPDNDVKLQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQTQDEARA 95

Query: 507 AYIEIVEGLIA 475
            Y ++V GLI+
Sbjct: 96  NYAKLVGGLIS 106


>Z68004-6|CAA91987.2|  116|Caenorhabditis elegans Hypothetical
           protein F47B10.7 protein.
          Length = 116

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 22/63 (34%), Positives = 41/63 (65%)
 Frame = -2

Query: 657 QLLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLI 478
           Q L  Y+ FKQA++GD +  +RPG+  +  + K+D+W +L G S+++A++ YI+ +  + 
Sbjct: 29  QKLTFYSLFKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMF 87

Query: 477 ASI 469
             I
Sbjct: 88  DKI 90


>Z92826-2|CAB07319.1|  266|Caenorhabditis elegans Hypothetical
           protein C18D11.2 protein.
          Length = 266

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = -2

Query: 651 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 472
           LN YA FKQAT G  D   +P   D++G  K++AW+KL   + ++A++AY++ +   I  
Sbjct: 28  LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86

Query: 471 IGLKE*KT 448
           +  KE KT
Sbjct: 87  V-QKEYKT 93


>AL023828-1|CAA19448.1|  115|Caenorhabditis elegans Hypothetical
           protein Y17G7B.1 protein.
          Length = 115

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -2

Query: 687 KNLXALPTYAQLLNLYAHFKQATVGDA--DPANRPGLLDLKGKAKFDAWHKLAGTSKEDA 514
           + L + PT  + L LYA +KQA  GD   +        D  G+ K+ AW    G + E  
Sbjct: 23  RRLKSEPTDRERLKLYALYKQALHGDIPNEDVYPVPAGDEVGRKKYAAWKSQKGANSEKC 82

Query: 513 QKAYIEIVEGLIASIG 466
           +  Y+ I E +I   G
Sbjct: 83  RADYVAIAEEMIKKYG 98


>U00063-1|AAK18960.1|  146|Caenorhabditis elegans Acyl-coenzyme a
           binding proteinprotein 4 protein.
          Length = 146

 Score = 37.5 bits (83), Expect = 0.009
 Identities = 16/52 (30%), Positives = 31/52 (59%)
 Frame = -2

Query: 651 LNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIE 496
           L +Y+ +KQAT G  D   +P    ++ + K++AW++L    + +A+  Y+E
Sbjct: 33  LQMYSLYKQATSGKCDTI-QPYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83


>Z81120-7|CAB03343.2|  274|Caenorhabditis elegans Hypothetical
           protein T12D8.3 protein.
          Length = 274

 Score = 37.1 bits (82), Expect = 0.012
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = -2

Query: 654 LLNLYAHFKQATVGDADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 475
           +L  Y  +KQA  G AD    P   +   + KF++W   +  S+  A +AY E++  L  
Sbjct: 51  ILKFYGLYKQAVEGPADSKKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDT 110

Query: 474 S 472
           S
Sbjct: 111 S 111


>U27312-8|AAZ32809.1|  219|Caenorhabditis elegans Hypothetical
           protein F26A1.15 protein.
          Length = 219

 Score = 34.3 bits (75), Expect = 0.083
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -2

Query: 576 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 481
           + G  K+ AW+K  G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = -2

Query: 663 YAQLLNLYAHFKQATVGD-ADPANRPGLLDLKGKAKFDAWHKLAGTSKEDAQKAYIEIVE 487
           Y   + L +  KQ   G+ +D  +  G LD+ G     AW +L   S+++A  +++ +V+
Sbjct: 47  YEDRIKLLSLSKQVQHGEISDEFDNAGWLDITGNDVNKAWRELGSLSRDEAMASFVFLVD 106


>U58755-1|AAB00691.3|  403|Caenorhabditis elegans Nematode astacin
           protease protein 8 protein.
          Length = 403

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 308 FFKKQIHIDFIKLSCSYINERYFQGAKA 225
           FF +QI  +F  LSC Y   +  Q AKA
Sbjct: 355 FFFEQIMKEFCSLSCGYCTPKALQTAKA 382


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,162,302
Number of Sequences: 27780
Number of extensions: 262504
Number of successful extensions: 504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)