Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_J22
         (512 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0021 - 155700-156023                                             31   0.54 
11_01_0023 - 162079-162402                                             31   0.54 
10_08_0688 - 19907799-19907978,19908077-19908280,19908387-199087...    29   2.2  
03_02_0948 - 12645972-12646010,12646612-12646750,12646846-126470...    27   8.8  
03_02_0738 - 10824121-10825572                                         27   8.8  

>12_01_0021 - 155700-156023
          Length = 107

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 22/94 (23%), Positives = 33/94 (35%)
 Frame = -2

Query: 322 SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXAGSGGMWRFYTDD 143
           S S +SVG+ + +   A+ GPR  +                       G   M RFYTD+
Sbjct: 6   SQSQSSVGAAAGAARPATVGPRGTAAAAAGMRRRRASTAGGSGGFSGGGGSNMLRFYTDE 65

Query: 142 SXXXXXXXXXXXXXXXLFIASGCM*HIWGKETRA 41
           +                FI      H++GK  R+
Sbjct: 66  APGLRLSPTMVLVMSLCFIGFVTALHVFGKLYRS 99


>11_01_0023 - 162079-162402
          Length = 107

 Score = 31.1 bits (67), Expect = 0.54
 Identities = 22/94 (23%), Positives = 33/94 (35%)
 Frame = -2

Query: 322 SPSATSVGSGSRSPTKASAGPRTASGXXXXXXXXXXXXXXXXXXXXXAGSGGMWRFYTDD 143
           S S +SVG+ + +   A+ GPR  +                       G   M RFYTD+
Sbjct: 6   SQSQSSVGASAGAARPATVGPRGTAAAAAGMRRRRASTAGGSGGFSGGGGSNMLRFYTDE 65

Query: 142 SXXXXXXXXXXXXXXXLFIASGCM*HIWGKETRA 41
           +                FI      H++GK  R+
Sbjct: 66  APGLRLSPTMVLVMSLCFIGFVTALHVFGKLYRS 99


>10_08_0688 -
           19907799-19907978,19908077-19908280,19908387-19908722,
           19908815-19909102,19909196-19909411,19910985-19911311
          Length = 516

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 85  ASGCM*HIWGKETRAEELKPDRWTETH 5
           A G M  +WGK+  AE  +P+RW + H
Sbjct: 418 AMGRMEFLWGKD--AEAFRPERWLDEH 442


>03_02_0948 -
           12645972-12646010,12646612-12646750,12646846-12647090,
           12647184-12647505,12647781-12648005,12648185-12648351,
           12648428-12648544,12648989-12649162,12649372-12649467,
           12649624-12649840,12650267-12650385,12650478-12650670,
           12651212-12651363,12651485-12651611,12651731-12651828
          Length = 809

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
 Frame = -1

Query: 221 NYYYNCSQKPKHWCWFW-RNVEVLYR*FSWSQSGASSCFSDXXPVYCIGMHVTHLGKRDE 45
           +++  C Q P HW     R ++ +Y  ++W     S        VY    +V+ L +R+ 
Sbjct: 725 DFFEQCKQDPNHWVEVSNRGLQRIYEKYTWKI--YSERLMTLAGVYGFWKYVSKLERRET 782

Query: 44  SRRIE 30
            R +E
Sbjct: 783 RRYLE 787


>03_02_0738 - 10824121-10825572
          Length = 483

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 139 ENHRYRTSTFLQNQHQCFGFWLQL 210
           + HR+    FL+N +   GFW  +
Sbjct: 344 QRHRWGAKVFLENSYNLHGFWADI 367


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,071,898
Number of Sequences: 37544
Number of extensions: 230136
Number of successful extensions: 550
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)