Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_J20
(444 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 286 1e-78
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 1e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 1e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 2e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 2e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 4e-20
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 1e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 3e-05
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 1e-04
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 0.32
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 1.3
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 1.7
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 25 5.2
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 25 5.2
SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomy... 25 5.2
SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein P... 25 6.9
SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomy... 25 6.9
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 25 6.9
SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulat... 24 9.1
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 286 bits (701), Expect = 1e-78
Identities = 139/147 (94%), Positives = 145/147 (98%)
Frame = -3
Query: 442 VXRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 263
V RLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDG
Sbjct: 70 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDG 129
Query: 262 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 83
RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIP
Sbjct: 130 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 189
Query: 82 PDQQRLIFAGKQLEDGRTLSDYXIQKE 2
PDQQRLIFAGKQLEDGRTLSDY IQKE
Sbjct: 190 PDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Score = 286 bits (701), Expect = 1e-78
Identities = 139/147 (94%), Positives = 145/147 (98%)
Frame = -3
Query: 442 VXRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 263
V RLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDG
Sbjct: 146 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDG 205
Query: 262 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 83
RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIP
Sbjct: 206 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 265
Query: 82 PDQQRLIFAGKQLEDGRTLSDYXIQKE 2
PDQQRLIFAGKQLEDGRTLSDY IQKE
Sbjct: 266 PDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Score = 286 bits (701), Expect = 1e-78
Identities = 139/147 (94%), Positives = 145/147 (98%)
Frame = -3
Query: 442 VXRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 263
V RLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDG
Sbjct: 222 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDG 281
Query: 262 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 83
RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIP
Sbjct: 282 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIP 341
Query: 82 PDQQRLIFAGKQLEDGRTLSDYXIQKE 2
PDQQRLIFAGKQLEDGRTLSDY IQKE
Sbjct: 342 PDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Score = 274 bits (672), Expect = 4e-75
Identities = 133/140 (95%), Positives = 139/140 (99%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 241 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 62
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 61 FAGKQLEDGRTLSDYXIQKE 2
FAGKQLEDGRTLSDY IQKE
Sbjct: 121 FAGKQLEDGRTLSDYNIQKE 140
Score = 165 bits (400), Expect = 4e-42
Identities = 79/84 (94%), Positives = 83/84 (98%)
Frame = -3
Query: 442 VXRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 263
V RLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDG
Sbjct: 298 VLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDG 357
Query: 262 RTLSDYNIQKESTLHLVLRLRGGM 191
RTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 358 RTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 1e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 241 IQKESTLHLVLRLRGG-MQIFVKTLTGK 161
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 126 bits (303), Expect = 2e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 14
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 13 IQKE 2
IQKE
Sbjct: 61 IQKE 64
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 1e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 241 IQKESTLHLVLRLRGG-MQIFVKTLTGK 161
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 126 bits (303), Expect = 2e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 14
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 13 IQKE 2
IQKE
Sbjct: 61 IQKE 64
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 2e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 241 IQKESTLHLVLRLRGG 194
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 126 bits (303), Expect = 2e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 14
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 13 IQKE 2
IQKE
Sbjct: 61 IQKE 64
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 2e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 241 IQKESTLHLVLRLRGG 194
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 126 bits (303), Expect = 2e-30
Identities = 60/64 (93%), Positives = 63/64 (98%)
Frame = -3
Query: 193 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 14
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 13 IQKE 2
IQKE
Sbjct: 61 IQKE 64
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 4e-20
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 241 IQKESTLHLVLRLRGG 194
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 73.3 bits (172), Expect = 2e-14
Identities = 30/62 (48%), Positives = 45/62 (72%)
Frame = -3
Query: 193 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 14
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 13 IQ 8
++
Sbjct: 61 LE 62
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 1e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = -3
Query: 391 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 230
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 3e-05
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = -3
Query: 421 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 242
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 241 IQKESTLHLVLRL 203
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 35.5 bits (78), Expect = 0.004
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = -3
Query: 193 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYX 14
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 13 IQ 8
IQ
Sbjct: 64 IQ 65
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = -3
Query: 394 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 221
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 36.7 bits (81), Expect = 0.002
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = -3
Query: 166 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYXIQ 8
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIK 62
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.1 bits (62), Expect = 0.32
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = -2
Query: 272 GRRTHVVRLQHSKRIHTPSCTASSWRHADLRENSDRKDHHFGSRSFGHN*ER 117
G R V L ++H P + A+ +EN HHF R F + +R
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFANAIDR 194
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 1.3
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = -3
Query: 418 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 245
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 244 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 155
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 24.2 bits (50), Expect = 9.1
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -3
Query: 190 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 20
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEE 61
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 1.7
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 197 STKTQYKMECGFFLNV 244
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.0 bits (52), Expect = 5.2
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 13/132 (9%)
Frame = -3
Query: 406 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFA------GKQLE-------D 266
K TGKT + + + ++ K+KIQ +P + L + GK +
Sbjct: 89 KNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTG 148
Query: 265 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 86
G TL D I+ T+H+V+ G V L GK + E + + + K+ E
Sbjct: 149 GTTLRDDIIRLNDTVHIVVGTPGR----VLDLAGKGVADFSECTTFVMDEADKLLSPEFT 204
Query: 85 PPDQQRLIFAGK 50
P +Q L + K
Sbjct: 205 PIIEQLLSYFPK 216
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 25.0 bits (52), Expect = 5.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 237 KKNPHSILYCVFVEAC 190
+K+P+S L C VEAC
Sbjct: 305 RKHPYSTLLCEIVEAC 320
>SPAC31A2.04c |||20S proteasome component beta 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 194
Score = 25.0 bits (52), Expect = 5.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 232 LFECCSLTTCVRLPAACQ 285
LF L TCVR+P ACQ
Sbjct: 116 LFWLDYLATCVRVPYACQ 133
>SPAC27E2.07 |pvg2|mug53|galactose residue biosynthesis protein
Pvg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 389
Score = 24.6 bits (51), Expect = 6.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 233 RIHTPSCTASSWRHADLRENSDRKDHH 153
R+ P+ SW H DL E D+ H+
Sbjct: 147 RVSHPNWAFVSWSHDDLNELVDKSYHN 173
>SPBC2F12.09c |atf21||transcription factor Atf21|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 24.6 bits (51), Expect = 6.9
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = -3
Query: 400 LTGKTITLEVEASDTIENVKAKIQDKEGIP---PDQQRLIFAGKQLEDGRTLSDYNIQKE 230
L G T EV T+ + + +G P P + I A +G TL+ YN
Sbjct: 94 LKGPERTSEVSLPQTVNLSEISNNNDKGQPTNTPPVRSTIVAPSLYSEGSTLNHYNNGSH 153
Query: 229 STLH 218
LH
Sbjct: 154 QVLH 157
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 24.6 bits (51), Expect = 6.9
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 268 DGRTLSDYNIQKESTLHLVLRLR-GGMQIFVKTLTGKTITL 149
DG TL++ N HL++RL+ ++ + +T+TL
Sbjct: 432 DGETLNEINTNNPEREHLIVRLKVDSQKLKIIVEQSQTLTL 472
>SPAC31G5.13 |rpn11|pad1, sks1, bfr2, mts5|19S proteasome regulatory
subunit Rpn11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 308
Score = 24.2 bits (50), Expect = 9.1
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -3
Query: 352 ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 233
E ++Q++ + P+Q R+ + GKQ D + D +QK
Sbjct: 252 EQYTERVQNEVTLSPEQLRIQYVGKQ--DPKKHLDAEVQK 289
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,919,754
Number of Sequences: 5004
Number of extensions: 38730
Number of successful extensions: 147
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 145
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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