Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_J19
         (639 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ487522-1|CAD31790.1| 1836|Drosophila melanogaster Polehole pro...    30   2.3  
AE014298-827|AAF46107.1| 1793|Drosophila melanogaster CG4790-PA ...    30   2.3  
AY047530-1|AAK77262.1|  784|Drosophila melanogaster GH03554p pro...    30   3.0  
AE014297-2286|AAF55372.1|  784|Drosophila melanogaster CG16941-P...    30   3.0  

>AJ487522-1|CAD31790.1| 1836|Drosophila melanogaster Polehole
           protein.
          Length = 1836

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 384 AGIVKGGKVMLVGSKMDDILAVKSVPKE-ILEEKATTQTSKEPL 256
           A +V   + +L+   +DD + V  +PKE +L E   TQ S EPL
Sbjct: 123 AEVVAWREFLLLAIVLDDSMEVYQLPKELLLSEDPATQVSFEPL 166


>AE014298-827|AAF46107.1| 1793|Drosophila melanogaster CG4790-PA
           protein.
          Length = 1793

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 384 AGIVKGGKVMLVGSKMDDILAVKSVPKE-ILEEKATTQTSKEPL 256
           A +V   + +L+   +DD + V  +PKE +L E   TQ S EPL
Sbjct: 123 AEVVAWREFLLLAIVLDDSMEVYQLPKELLLSEDPATQVSFEPL 166


>AY047530-1|AAK77262.1|  784|Drosophila melanogaster GH03554p
           protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 513 ITFAYDATVLELKAHLERICGVPQSAQKLIIKGM-ARDEMTLRKAGIVKGGKVML 352
           +T A    +  LK  L+   G+P + QK+  +GM  +D  T+    +V G  V L
Sbjct: 720 VTMALSEPIANLKTKLQDETGMPPAKQKIFYEGMFFKDSNTMAFYNLVNGTTVHL 774


>AE014297-2286|AAF55372.1|  784|Drosophila melanogaster CG16941-PA
           protein.
          Length = 784

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 513 ITFAYDATVLELKAHLERICGVPQSAQKLIIKGM-ARDEMTLRKAGIVKGGKVML 352
           +T A    +  LK  L+   G+P + QK+  +GM  +D  T+    +V G  V L
Sbjct: 720 VTMALSEPIANLKTKLQDETGMPPAKQKIFYEGMFFKDSNTMAFYNLVNGTTVHL 774


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,226,252
Number of Sequences: 53049
Number of extensions: 565749
Number of successful extensions: 1787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)