Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_J19
         (639 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin ...    31   0.70 
Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical ...    29   2.1  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   4.9  
Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin
           protein 6 protein.
          Length = 407

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -1

Query: 603 GTSDTTEESEVCEIPEQVEFTVVFNKVKHDITFAYDATVLELKAHLERICG 451
           G  DT   + VCE+ E +E +  +N   H  +F   AT  + +   E+ CG
Sbjct: 138 GDCDTETRAFVCELTETLEDSCEYNYNGHCYSFHQPATFAQAQVICEQECG 188


>Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 240 HRKVLDKGIPPDVMPGIKGVKEPLPPVPLS 151
           +RK  DK IP  V+   K    PLPP P S
Sbjct: 92  YRKTYDKTIPKTVLSSKKDASLPLPPTPPS 121


>Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -1

Query: 240 HRKVLDKGIPPDVMPGIKGVKEPLPPVPLS 151
           +RK  DK IP  V+   K    PLPP P S
Sbjct: 92  YRKTYDKTIPKTVLSSKKDASLPLPPTPPS 121


>AC084268-2|AAL16324.1|  150|Caenorhabditis elegans Hypothetical
           protein Y92H12BL.5 protein.
          Length = 150

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -1

Query: 477 KAHLERICGVPQSAQKLIIKGMARDEMTLRKAGIVKGGKVMLVGSKMD-DILAVKSVPKE 301
           K  L    G    A  L IKG  ++ + L  +G   GGK ++ G  ++ D  A ++  +E
Sbjct: 14  KVRLRDTDGFRIRAAALCIKGTGKETLVLLVSGGKDGGKWVVPGGGIEKDECAEEAAHRE 73

Query: 300 ILEEKATTQT 271
           ++EE     T
Sbjct: 74  LMEEAGVRAT 83


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 536  TTVNSTCSGISQTSLSSVVSDVPAXHSAGGSICN 637
            TTV S+  G +QTS+SS  S VP   S G ++ N
Sbjct: 1530 TTVGSSTVGATQTSVSS--STVPNTGSTGSTVTN 1561


>Z99278-4|CAB16492.1|  871|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3b protein.
          Length = 871

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 186 GVKEPL---PPVPLSGMLNKHGGKVRLTFKPDQDQ 91
           G  EPL   PP  +SG +N+ GG +R  F   Q Q
Sbjct: 499 GGVEPLMGGPPYQMSGQINQMGGPIRGGFGMQQQQ 533


>Z99278-3|CAB16493.1|  867|Caenorhabditis elegans Hypothetical
           protein Y53C12B.3a protein.
          Length = 867

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -1

Query: 186 GVKEPL---PPVPLSGMLNKHGGKVRLTFKPDQDQ 91
           G  EPL   PP  +SG +N+ GG +R  F   Q Q
Sbjct: 496 GGVEPLMGGPPYQMSGQINQMGGPIRGGFGMQQQQ 530


>Z73912-8|CAA98148.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 333 DILAVKSVPKEILEEKATTQTSKEPLCMQKI 241
           +++AVK + K  ++E +T+Q  KE  CM+ +
Sbjct: 51  EMVAVKIIDKTKMDEASTSQIMKEVRCMKLV 81


>Z72517-7|CAA96698.1| 1016|Caenorhabditis elegans Hypothetical
           protein ZK524.4 protein.
          Length = 1016

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -1

Query: 333 DILAVKSVPKEILEEKATTQTSKEPLCMQKI 241
           +++AVK + K  ++E +T+Q  KE  CM+ +
Sbjct: 51  EMVAVKIIDKTKMDEASTSQIMKEVRCMKLV 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,145,536
Number of Sequences: 27780
Number of extensions: 295249
Number of successful extensions: 903
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)