Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_J18
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 89 2e-18
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 89 3e-18
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 83 3e-16
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 82 5e-16
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 82 5e-16
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 74 1e-13
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 40 0.002
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 40 0.002
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 38 0.006
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 34 0.12
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 34 0.12
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 34 0.12
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 33 0.16
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 32 0.36
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 29 3.4
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 3.4
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 89.4 bits (212), Expect = 2e-18
Identities = 43/89 (48%), Positives = 58/89 (65%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPG 546
+K+ SEN +E+MK +GVGLITRKAA + PT+E++ +GD + STFK T + FK G
Sbjct: 9 WKLIHSENFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLG 68
Query: 545 EEFEEDRADGAKVKSVCTFEGNTLKQVQK 459
+EF+E DG VKSV FE +QK
Sbjct: 69 QEFDETTPDGRTVKSVVNFENGKFIHIQK 97
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 89.0 bits (211), Expect = 3e-18
Identities = 51/125 (40%), Positives = 69/125 (55%), Gaps = 2/125 (1%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPG 546
+K+ +EN DE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T++ FK G
Sbjct: 11 WKLVQTENFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLG 70
Query: 545 EEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTC 372
EEF E+ D S+ TFE L Q + V E K + T + DV C
Sbjct: 71 EEFVENSPDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVIC 130
Query: 371 TRVYK 357
R ++
Sbjct: 131 RREWE 135
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 82.6 bits (195), Expect = 3e-16
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 2/124 (1%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPG 546
+K+ SEN ++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T ++F G
Sbjct: 10 WKLVESENFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLG 69
Query: 545 EEFEEDRADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVTC 372
EF+E DG + KS T E + VQK + R F E++ + + V
Sbjct: 70 VEFDETTPDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVIS 129
Query: 371 TRVY 360
R Y
Sbjct: 130 RRAY 133
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 81.8 bits (193), Expect = 5e-16
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPG 546
+ SSEN DE++K +GVG R A P +E +GDE+ + ++STFK +K+K G
Sbjct: 11 WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLG 70
Query: 545 EEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCT 369
+E ADG V SV + E + L Q++ G + + + + ++ V T V CT
Sbjct: 71 TASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCT 130
Query: 368 RVYK 357
RVY+
Sbjct: 131 RVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 81.8 bits (193), Expect = 5e-16
Identities = 43/124 (34%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPG 546
+ SSEN DE++K +GVG R A P +E +GDE+ + ++STFK +K+K G
Sbjct: 26 WNFVSSENFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLG 85
Query: 545 EEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCT 369
+E ADG V SV + E + L Q++ G + + + + ++ V T V CT
Sbjct: 86 TASDEKTADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCT 145
Query: 368 RVYK 357
RVY+
Sbjct: 146 RVYE 149
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPG 546
+K+ SEN +E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK ++ FK
Sbjct: 11 WKLVHSENFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIR 70
Query: 545 EEFEEDRADGAKVKSVCTFE 486
E+F E D ++ TFE
Sbjct: 71 EKFVEIAPDERSYNTLVTFE 90
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 6/129 (4%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSSTFKTTEMK-F 555
Y + SEN DEF+ GV R+ + L K+ +YN+ ++ K T +
Sbjct: 16 YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNTLYHGW 75
Query: 554 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAVMTAK 384
+ G+ FE + DG K +F+ L + P+ TY +++ M
Sbjct: 76 ELGKTFEAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVMKMVNN 135
Query: 383 DVTCTRVYK 357
+TC R +K
Sbjct: 136 GITCRRWFK 144
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 6/129 (4%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSSTFKTTEMK-F 555
Y + SEN DEF+ GV R+ + L K+ +YN+ ++ K T +
Sbjct: 31 YDLDRSENFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNTLYHGW 90
Query: 554 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAVMTAK 384
+ G+ FE + DG K +F+ L + P+ TY +++ M
Sbjct: 91 ELGKTFEAEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVMKMVNN 150
Query: 383 DVTCTRVYK 357
+TC R +K
Sbjct: 151 GITCRRWFK 159
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 38.3 bits (85), Expect = 0.006
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSSTFKTTEMK-F 555
Y++ SEN DEF+ + GV R+ +T + ++ +YN+ ++ K T + +
Sbjct: 11 YQLDKSENFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLTSKKNTNYQAW 70
Query: 554 KPGEEFEEDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAV-MTA 387
+ G++FE DG + + F+ L + P+ TY + + M
Sbjct: 71 ELGKKFEAPGLDGNQHEITFDFKDEILSEHHIRLNEPETSAETYFYTIDDQNQLVMRMEN 130
Query: 386 KDVTCTRVYK 357
+ C R +K
Sbjct: 131 NGIVCRRWFK 140
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = -2
Query: 713 SSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 549
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = -2
Query: 713 SSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 549
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/55 (38%), Positives = 27/55 (49%)
Frame = -2
Query: 713 SSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 549
SSE ++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 2 SSEWDNKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 33.5 bits (73), Expect = 0.16
Identities = 32/129 (24%), Positives = 50/129 (38%), Gaps = 6/129 (4%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP- 549
+ + SEN DE++ G G TRK T K ++ S+ ++ +K
Sbjct: 28 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNV 87
Query: 548 --GEEFEEDRADGAKVKSVCTFEGNTLKQVQK---APDGLEVTYVREFGPEEMKAVMTAK 384
G+ F+ + D K + T + L + K D E TY F E + M+
Sbjct: 88 QLGKAFQGEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMSFN 147
Query: 383 DVTCTRVYK 357
V R YK
Sbjct: 148 GVEGRRFYK 156
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 32.3 bits (70), Expect = 0.36
Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Frame = -2
Query: 725 YKMTSSENXDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF--- 555
+ + SEN DE++ G G TRK T K+ ++ NL S + + F
Sbjct: 30 FDLDHSENFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANK-NLFDYSNLTSKKDVFYKN 88
Query: 554 -KPGEEFEEDRADGAKVKSVCTF-EGNTLKQVQKAPDG--LEVTYVREFGPEEMKAVMTA 387
+ G +FE + D K + T +G+ + + +G E TY F + + M+
Sbjct: 89 VQIGSKFEGEGLDNTKHEVTFTLKDGHLFEHHKPLEEGESKEETYEYYFDGDFLIQKMSF 148
Query: 386 KDVTCTRVYK 357
++ R YK
Sbjct: 149 NNIEGRRFYK 158
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 314 ADSRTSRGTIMFI*HLFYTLALSSFFVKLILVFTSVIVCRSNC 186
ADS + G I+F HLF+ + S F L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2
Query: 659 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 531
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,009
Number of Sequences: 27780
Number of extensions: 294781
Number of successful extensions: 801
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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