Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_J14
(734 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 58 5e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 55 5e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 54 8e-08
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 52 4e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 52 6e-07
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 51 7e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 51 1e-06
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 51 1e-06
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 51 1e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 49 3e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 49 3e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 49 3e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 49 3e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 49 3e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 49 3e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 48 7e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 46 2e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 46 2e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 43 2e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 42 3e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 5e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 42 6e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 42 6e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 41 8e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 41 0.001
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 41 0.001
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 40 0.001
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 0.002
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 0.002
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 39 0.003
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 39 0.004
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 39 0.004
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 39 0.004
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 39 0.004
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 39 0.004
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 39 0.004
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 37 0.017
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 37 0.017
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 37 0.017
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 37 0.017
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 37 0.017
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.039
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.039
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.039
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 36 0.039
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 36 0.039
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 34 0.091
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 34 0.091
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 33 0.16
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 33 0.16
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 33 0.16
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 31 0.85
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 31 0.85
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 31 0.85
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 31 1.1
U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 30 2.0
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 28 6.0
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 28 6.0
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.9
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 28 7.9
AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical ... 28 7.9
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 74.9 bits (176), Expect = 5e-14
Identities = 34/76 (44%), Positives = 54/76 (71%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++VYN+ +T++ LWQLF +GAI ++K+++D T++ KG+AFV+M Y EA A+ +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 463 NGYTLNGQVLSVSFKT 416
NG L G+ L V FK+
Sbjct: 435 NGTNLAGKTLQVVFKS 450
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = -2
Query: 592 LFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVLSVSF 422
LF G I+S K+++D T ++ G+ FVN ++A A+ + NG L + + VS+
Sbjct: 61 LFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSY 117
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
+ +YV I + L +F P+G I + +++ D T +KG FV + DEA +AI+
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187
Query: 469 ALNGYTLNG--QVLSVSFKTQKRS 404
LNG +G + ++V F S
Sbjct: 188 TLNGSIPSGCSEQITVKFANNPAS 211
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/75 (38%), Positives = 45/75 (60%)
Frame = -2
Query: 652 QTTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
Q +V+V NI + E + +F G + SIK++ D ET K KG+ F+ + A +AI
Sbjct: 17 QRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAI 76
Query: 472 QALNGYTLNGQVLSV 428
+ LNGY L+G++L V
Sbjct: 77 RNLNGYELSGRILRV 91
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V ++ E + L + F P+G + KVI+D T K+KG+ FV+ + +EA AI+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 463 NGYTLNGQVLSVSFKTQKRSGQ 398
NG L + + ++ T+K Q
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQ 105
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T+VYV NI TE+ + Q F +G I +++ K +G+AFV D AA AI
Sbjct: 128 TSVYVGNIASLTED-EIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIV 180
Query: 469 ALNGYTLNGQVLSVSF 422
+N + GQ++ S+
Sbjct: 181 QMNNQDVGGQLVRCSW 196
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V ++ E + L + F P+G + KVI+D T K+KG+ FV+ + +EA AI+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 463 NGYTLNGQVLSVSFKTQKRSGQ 398
NG L + + ++ T+K Q
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQ 115
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T+VYV NI TE+ + Q F +G I +++ K +G+AFV D AA AI
Sbjct: 138 TSVYVGNIASLTED-EIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIV 190
Query: 469 ALNGYTLNGQVLSVSF 422
+N + GQ++ S+
Sbjct: 191 QMNNQDVGGQLVRCSW 206
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V ++ E + L + F P+G + KVI+D T K+KG+ FV+ + +EA AI+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 463 NGYTLNGQVLSVSFKTQKRSGQ 398
NG L + + ++ T+K Q
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQ 218
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T+VYV NI TE+ + Q F +G I +++ K +G+AFV D AA AI
Sbjct: 241 TSVYVGNIASLTED-EIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIV 293
Query: 469 ALNGYTLNGQVLSVSF 422
+N + GQ++ S+
Sbjct: 294 QMNNQDVGGQLVRCSW 309
Score = 37.1 bits (82), Expect = 0.013
Identities = 22/78 (28%), Positives = 39/78 (50%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
T+YV N+ E + LF G++ KVI D N +AFV ++ +A+ A+Q
Sbjct: 47 TLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQT 103
Query: 466 LNGYTLNGQVLSVSFKTQ 413
+N L + + V++ +
Sbjct: 104 MNKRLLLDREMKVNWAVE 121
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V ++ E + L + F P+G + KVI+D T K+KG+ FV+ + +EA AI+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 463 NGYTLNGQVLSVSFKTQKRSGQ 398
NG L + + ++ T+K Q
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQ 186
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T+VYV NI TE+ + Q F +G I +++ K +G+AFV D AA AI
Sbjct: 209 TSVYVGNIASLTED-EIRQGFASFGRITEVRIFK------MQGYAFVKFDNKDAAAKAIV 261
Query: 469 ALNGYTLNGQVLSVSF 422
+N + GQ++ S+
Sbjct: 262 QMNNQDVGGQLVRCSW 277
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSI-KVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++V N+ E +E L+ F +G I + K+++D ++ +KGFAF+N ++ + A++A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161
Query: 466 LNGYTLNGQVLSVSFKTQKRS 404
+NG L + ++VS+ ++ S
Sbjct: 162 MNGQFLCNRAITVSYAFKRDS 182
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
T+YV + E+ E LW+L G + S+ + KD T ++GF FV ++A AI+
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 466 LNGYTLNGQVLSVS 425
LN L G+ + V+
Sbjct: 74 LNMIKLYGKPIKVN 87
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSI-KVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++V N+ E +E L+ F +G I + K+++D ++ +KGFAF+N ++ + A++A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 171
Query: 466 LNGYTLNGQVLSVSFKTQKRS 404
+NG L + ++VS+ ++ S
Sbjct: 172 MNGQFLCNRAITVSYAFKRDS 192
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/74 (33%), Positives = 40/74 (54%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
T+YV + E+ E LW+L G + S+ + KD T ++GF FV ++A AI+
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 466 LNGYTLNGQVLSVS 425
LN L G+ + V+
Sbjct: 84 LNMIKLYGKPIKVN 97
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
+VYV N +T E L F G I++++++ D ET + +GFAF+ E A A++
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 466 LNGYTLNGQVLSVS 425
+NG NG+ L V+
Sbjct: 66 MNGAEFNGRPLRVN 79
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/75 (33%), Positives = 43/75 (57%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
+VYV N+ + E + F G +++++++ D ET + +GFAFV E A A++
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 466 LNGYTLNGQVLSVSF 422
LNG NG+ L V++
Sbjct: 67 LNGVAFNGRNLRVNY 81
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
T+YV E+ E L F P+G + +I + D E+ K++GF FV ++AAMAI
Sbjct: 12 TLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDN 71
Query: 466 LNGYTLNGQVLSVSF 422
+N L G+ + V+F
Sbjct: 72 MNESELFGKTIRVNF 86
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ +E + L Q+F P+G I S KV D T ++K F FV+ + AI A+
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 463 NGYTLNGQVLSVSFKTQKRSGQ 398
NG+ + + L V K + +
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESR 512
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ + ++ E + LF +G +D + V++ + +KG AFV + +A MAI AL
Sbjct: 126 LFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGA-SKGCAFVKYKHGLDAHMAISAL 184
Query: 463 NG-YTLNGQVLSVSFK 419
+G T+ G S+ K
Sbjct: 185 HGSQTMPGASSSLVVK 200
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I EE L LF +G I ++KD T +KG AF+ D A L
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 463 NGY-TLNGQVLSVSFK 419
+ TL G ++ K
Sbjct: 91 HDQKTLPGMNRAMQVK 106
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/82 (30%), Positives = 44/82 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ +E + L Q+F P+G I S KV D T ++K F FV+ + AI A+
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 463 NGYTLNGQVLSVSFKTQKRSGQ 398
NG+ + + L V K + +
Sbjct: 491 NGFQIGMKRLKVQLKRPRNESR 512
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ + ++ E + LF +G +D + V++ + +KG AFV + +A MAI AL
Sbjct: 126 LFIGMLSKQQSEDEVRALFATFGELDEVTVLRGADGA-SKGCAFVKYKHGLDAHMAISAL 184
Query: 463 NG-YTLNGQVLSVSFK 419
+G T+ G S+ K
Sbjct: 185 HGSQTMPGASSSLVVK 200
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I EE L LF +G I ++KD T +KG AF+ D A L
Sbjct: 31 LFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQATL 90
Query: 463 NGY-TLNGQVLSVSFK 419
+ TL G ++ K
Sbjct: 91 HDQKTLPGMNRAMQVK 106
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 51.2 bits (117), Expect = 7e-07
Identities = 26/81 (32%), Positives = 41/81 (50%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
+VYV N +T E L F G + +++++ D ET + +GFAFV E A A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 466 LNGYTLNGQVLSVSFKTQKRS 404
NG NG+ L V+ + +
Sbjct: 65 FNGVDFNGRALRVNLAQNRNN 85
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV +I E E L + F P+G I SI + DP T +K FAFV + A +A +++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 463 NGYTLNGQVLSVS 425
NG L G+ L V+
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/70 (25%), Positives = 34/70 (48%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
VYV ++ + E L +F +G I ++ + P + ++GF ++ + AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 463 NGYTLNGQVL 434
N + L GQ L
Sbjct: 269 NMFDLGGQYL 278
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV +I E E L + F P+G I SI + DP T +K FAFV + A +A +++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 463 NGYTLNGQVLSVS 425
NG L G+ L V+
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
VYV ++ + E L +F +G I ++ + P + ++GF ++ + AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 463 NGYTLNGQVLSV 428
N + L GQ L V
Sbjct: 269 NMFDLGGQYLRV 280
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV +I E E L + F P+G I SI + DP T +K FAFV + A +A +++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 463 NGYTLNGQVLSVS 425
NG L G+ L V+
Sbjct: 164 NGQMLGGRNLKVN 176
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
VYV ++ + E L +F +G I ++ + P + ++GF ++ + AI +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 463 NGYTLNGQVLSV 428
N + L GQ L V
Sbjct: 269 NMFDLGGQYLRV 280
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V ++ E + L + F +G + K+I+D T K KG+ FV+ ++A AI +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG L + + ++ T+K
Sbjct: 194 NGAWLGRRTIRTNWATRK 211
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T+VYV NI E+ + + F +G I+ ++ T K +G+AFV + AA AI
Sbjct: 256 TSVYVGNIANLGED-EIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIV 308
Query: 469 ALNGYTLNGQVLSVSFKTQKRSGQ 398
+N + GQ++ S+ SG+
Sbjct: 309 QMNNADIGGQIVRCSWGKSGDSGK 332
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = -2
Query: 652 QTTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+ T V N+ +E E L LFG G + I + +D T KGFAFV D+AA AI
Sbjct: 175 ENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAI 234
Query: 472 QALNGYTLNGQVLSVSF 422
LN + VL V +
Sbjct: 235 AELNDIRMYHMVLKVEW 251
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ ++ + L F P+G I S KV D T +K F FV+ A AI A+
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG+ + + L V K +
Sbjct: 397 NGFQIGSKRLKVQLKVDR 414
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ ++ + L F P+G I S KV D T +K F FV+ A AI A+
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG+ + + L V K +
Sbjct: 561 NGFQIGSKRLKVQLKVDR 578
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ ++ + L F P+G I S KV D T +K F FV+ A AI A+
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG+ + + L V K +
Sbjct: 561 NGFQIGSKRLKVQLKVDR 578
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ ++ + L F P+G I S KV D T +K F FV+ A AI A+
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG+ + + L V K +
Sbjct: 490 NGFQIGSKRLKVQLKVDR 507
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/78 (30%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++Y++ ++ + L F P+G I S KV D T +K F FV+ A AI A+
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG+ + + L V K +
Sbjct: 561 NGFQIGSKRLKVQLKVDR 578
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T VYV N G+ + L +LF +G I S +V+ K+KGF FV +EA A+Q
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQ 210
Query: 469 ALNGYTLNGQVLSVSF-KTQKRS 404
AL+ T+ G L + + QK+S
Sbjct: 211 ALHDSTIEGTDLKLHVCRAQKKS 233
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV N+ E ++ L + F YG I S KV+ D E ++KGF FV + +EA A+ +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 463 NGYTLNGQVLSVSFKTQK 410
N + + L V+ +K
Sbjct: 318 NSKMVCSKPLYVAIAQRK 335
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/73 (27%), Positives = 43/73 (58%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++YV ++ + E L++ F G + SI+V +D T+ + G+A+VN ++ +A A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 466 LNGYTLNGQVLSV 428
+N L+G+ + +
Sbjct: 93 MNFEALHGKPMRI 105
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T VYV N G+ + L +LF +G I S +V+ K+KGF FV +EA A+Q
Sbjct: 150 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQ 207
Query: 469 ALNGYTLNGQVLSVSF-KTQKRS 404
AL+ T+ G L + + QK+S
Sbjct: 208 ALHDSTIEGTDLKLHVCRAQKKS 230
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV N+ E ++ L + F YG I S KV+ D E ++KGF FV + +EA A+ +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 463 NGYTLNGQVLSVSFKTQK 410
N + + L V+ +K
Sbjct: 315 NSKMVCSKPLYVAIAQRK 332
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ + + +++ F +G I S KV D E +KG+ FV+ + A AIQ +
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
NG L G+ + V K Q R+
Sbjct: 118 NGMLLAGKKVFVG-KFQPRA 136
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T VYV N G+ + L +LF +G I S +V+ K+KGF FV +EA A+Q
Sbjct: 213 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQ 270
Query: 469 ALNGYTLNGQVLSVSF-KTQKRS 404
AL+ T+ G L + + QK+S
Sbjct: 271 ALHDSTIEGTDLKLHVCRAQKKS 293
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV N+ E ++ L + F YG I S KV+ D E ++KGF FV + +EA A+ +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 463 NGYTLNGQVLSVSFKTQK 410
N + + L V+ +K
Sbjct: 378 NSKMVCSKPLYVAIAQRK 395
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/73 (27%), Positives = 43/73 (58%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++YV ++ + E L++ F G + SI+V +D T+ + G+A+VN ++ +A A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 466 LNGYTLNGQVLSV 428
+N L+G+ + +
Sbjct: 93 MNFEALHGKPMRI 105
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ + + +++ F +G I S KV D E +KG+ FV+ + A AIQ +
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
NG L G+ + V K Q R+
Sbjct: 181 NGMLLAGKKVFVG-KFQPRA 199
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T VYV N G+ + L ++F +G I S +V+ K+KGF FV +EA A+Q
Sbjct: 213 TNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQ 270
Query: 469 ALNGYTLNGQVLSVSF-KTQKRS 404
AL+ T+ G L + + QK+S
Sbjct: 271 ALHDSTIEGTDLKLHVCRAQKKS 293
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/78 (33%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV N+ E ++ L + F YG I S KV+ D E ++KGF FV + +EA A+ +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 463 NGYTLNGQVLSVSFKTQK 410
N + + L V+ +K
Sbjct: 378 NSKMVCSKPLYVAIGQRK 395
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/73 (27%), Positives = 43/73 (58%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++YV ++ + E L++ F G + SI+V +D T+ + G+A+VN ++ +A A+
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 466 LNGYTLNGQVLSV 428
+N L+G+ + +
Sbjct: 93 MNFEALHGKPMRI 105
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ + + +++ F +G I S KV D E +KG+ FV+ + A AIQ +
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
NG L G+ + V K Q R+
Sbjct: 181 NGMLLAGKKVFVG-KFQPRA 199
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/80 (27%), Positives = 42/80 (52%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V ++ ++ L F +G + KVI+D +T+K+KG+ FV+ A AI +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
NG + + + ++ +K S
Sbjct: 197 NGKWIGKRAVRTNWAARKNS 216
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T+VYV NI ++T + L LF YG I +++ K + +AFV + + A AI
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAIM 290
Query: 469 ALNGYTLNGQVLSVSF-KTQ 413
+NG + G + S+ +TQ
Sbjct: 291 EMNGKEMAGNQVRCSWGRTQ 310
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ T+E L LF YG + ++V+ D +T KGFA V + A A AL
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
+GY G+++ + +KR+
Sbjct: 341 DGYVFKGRMMHILPGDEKRT 360
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKK-NKGFAFVNMREYDEAAMAI 473
T + V N+ E + LF +GA+ +I++ K P K+ ++GF FV+ DEA A
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRAF 807
Query: 472 QAL 464
+L
Sbjct: 808 DSL 810
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T + V N+ E L + F YG I +K + K +GFAFV + A+ A+
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDAS-LKYTKEGKFRGFAFVGFLDEGSASNALA 61
Query: 469 ALNGYTLNGQVLSV 428
N N + L+V
Sbjct: 62 KSNQTFFNSKKLTV 75
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/82 (28%), Positives = 45/82 (54%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T V V N+ + +E + +F +G I+ I + D ++N+GFA + R D+A + +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATITFRNADDAQKSCE 185
Query: 469 ALNGYTLNGQVLSVSFKTQKRS 404
LN + L G+ + +S K + ++
Sbjct: 186 QLNNFELAGRCIRLSIKQESQA 207
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = -2
Query: 652 QTTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
Q T+ + I +T L + F GA+ +++I D T ++KG +V + + + +
Sbjct: 24 QRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL 83
Query: 472 QALNGYTLNGQVLSVSFKTQKRS 404
ALNG L G L + +R+
Sbjct: 84 -ALNGQRLMGAPLQIQRTCAERN 105
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/82 (28%), Positives = 45/82 (54%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T V V N+ + +E + +F +G I+ I + D ++N+GFA + R D+A + +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVD-SNRENRGFATITFRNADDAQKSCE 330
Query: 469 ALNGYTLNGQVLSVSFKTQKRS 404
LN + L G+ + +S K + ++
Sbjct: 331 QLNNFELAGRCIRLSIKQESQA 352
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = -2
Query: 652 QTTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
Q T+ + I +T L + F GA+ +++I D T ++KG +V + + + +
Sbjct: 169 QRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGL 228
Query: 472 QALNGYTLNGQVLSVSFKTQKRS 404
ALNG L G L + +R+
Sbjct: 229 -ALNGQRLMGAPLQIQRTCAERN 250
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/72 (27%), Positives = 41/72 (56%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+Y+ + E + +F YG + +I +I+D +T K+KGFAF+ ++ +A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 463 NGYTLNGQVLSV 428
NG +L+ +++ V
Sbjct: 100 NGISLHKRMIRV 111
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV NI E+ + L F +G I S KV+ D E ++KGF FV + +EA A+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 463 NGYTLNGQVLSVSFKTQK 410
N + + L V+ +K
Sbjct: 404 NSKMIGAKPLYVALAQRK 421
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/73 (23%), Positives = 43/73 (58%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++Y+ ++ + E L++ F G + SI+V +D ++ + G+A+VN ++ +A A+
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 466 LNGYTLNGQVLSV 428
+N ++G+ + +
Sbjct: 118 MNFEVIHGRPMRI 130
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ + +++ F +G I S KV D E +KG+ FV+ A AI+ +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIEKV 205
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
NG L+ + + V K Q R+
Sbjct: 206 NGMLLSDKKVYVG-KFQPRA 224
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 45.2 bits (102), Expect = 5e-05
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV NI E+ + L F +G I S KV+ D E ++KGF FV + +EA A+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 463 NGYTLNGQVLSVSFKTQK 410
N + + L V+ +K
Sbjct: 404 NSKMIGAKPLYVALAQRK 421
Score = 41.1 bits (92), Expect = 8e-04
Identities = 17/73 (23%), Positives = 43/73 (58%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
++Y+ ++ + E L++ F G + SI+V +D ++ + G+A+VN ++ +A A+
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 466 LNGYTLNGQVLSV 428
+N ++G+ + +
Sbjct: 118 MNFEVIHGRPMRI 130
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ + +++ F +G I S KV D E +KG+ FV+ A AI+ +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIEKV 205
Query: 463 NGYTLNGQVLSVSFKTQKRS 404
NG L+ + + V K Q R+
Sbjct: 206 NGMLLSDKKVYVG-KFQPRA 224
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = -2
Query: 637 VYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNG 458
V+N+ T E L +FG +G I+ ++ D + ++GF F+ ++A A L
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 457 YTLNGQVLSVSFKTQKR 407
L+G + V F KR
Sbjct: 140 TDLDGHKIRVDFSLTKR 156
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPY-GAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
++V N+ E E AL F G ++++++++D +T K KGFAFVN ++ ++A+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+Y+ NI E E L +LF Y ++D +K +KD +AF++ E D+ A++
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKD--------YAFIHFNERDDCLKAMEEW 430
Query: 463 NGYTLNGQVLSVS 425
NG L G V+ S
Sbjct: 431 NGKELEGTVVEAS 443
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV +I + E L LF G I ++++ DP + ++G+AFV ++AA A +
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 463 NGYTLN-GQVLSVS 425
+G+ ++ G+ L V+
Sbjct: 262 DGHEISTGKPLKVN 275
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+ ++G E + L + F Y + KV+++ T K+KG+ FV+ R+ ++ A++ +
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 463 NG 458
+G
Sbjct: 265 DG 266
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T +Y+ + T + L ++ YG I S K I D T KG+ FV+ AA A+
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 469 ALNGYTLNGQVLSVSFKTQ 413
LN + Q+ + + Q
Sbjct: 167 GLNTEGVQAQMAKLQQQEQ 185
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.9 bits (94), Expect = 5e-04
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T +Y+ + T + L ++ YG I S K I D T KG+ FV+ AA A+
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 469 ALNGYTLNGQVLSVSFKTQ 413
LN + Q+ + + Q
Sbjct: 141 GLNTEGVQAQMAKLQQQEQ 159
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T++ + N+ +T L + F YG I + + +D ++++KGF FV E +A A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 469 ALNGYTLNGQVLSVSFKTQKR 407
+G ++G+ L V+ R
Sbjct: 79 RTDGKLVDGRELRVTLAKYDR 99
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/81 (27%), Positives = 42/81 (51%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
T++ + N+ +T L + F YG I + + +D ++++KGF FV E +A A+
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 469 ALNGYTLNGQVLSVSFKTQKR 407
+G ++G+ L V+ R
Sbjct: 79 RTDGKLVDGRELRVTLAKYDR 99
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V+V NI EE E + F YG I +I + D T KG+A V EA AI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 463 NGYTLNGQVLSVSF---KTQKRSGQ 398
N L GQ + V + K +K SG+
Sbjct: 117 NDTDLLGQNVKVDWCFVKGKKTSGK 141
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V NI + E L +F G + +++I + + +KGF FV M+ D+A A
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEF 159
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG T+ G+ + V+ TQ+
Sbjct: 160 NGTTIEGRRVEVNLATQR 177
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/78 (30%), Positives = 42/78 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V NI + E L +F G + +++I + + +KGF FV M+ D+A A
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEF 159
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG T+ G+ + V+ TQ+
Sbjct: 160 NGTTIEGRRVEVNLATQR 177
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/75 (34%), Positives = 35/75 (46%)
Frame = -2
Query: 652 QTTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+ T+YV N EE +E L +LF G + +KVI N FA V + AI
Sbjct: 12 ERTIYVANFSEEVDEELLEELFIQAGPV--VKVILRDVRDSNAKFALVEFEDELSVLFAI 69
Query: 472 QALNGYTLNGQVLSV 428
+ +NG L Q L V
Sbjct: 70 ELMNGVRLFNQELQV 84
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
VYV N+ + E + +F YG I + D ++ + FAFV ++ +A A++A
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 463 NGYTLNGQVLSVSF 422
+GY +G+ + V F
Sbjct: 67 DGYEFDGRRIRVEF 80
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/74 (29%), Positives = 39/74 (52%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
VYV N+ + E + +F YG I + D ++ + FAFV ++ +A A++A
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRIKYV----DIKSGRGPAFAFVEFEDHRDAEDAVRAR 66
Query: 463 NGYTLNGQVLSVSF 422
+GY +G+ + V F
Sbjct: 67 DGYEFDGRRIRVEF 80
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 41/74 (55%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+Y+ N+ + ++++FG +GA+ I+V ET+ G AFV + +A A + L
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETR---GTAFVVYEDIFDAKTACEHL 77
Query: 463 NGYTLNGQVLSVSF 422
+GY ++ + L V +
Sbjct: 78 SGYNVSNRYLVVLY 91
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
TVY+ ++ T + L F YG+I S+ + DP+T ++GFA + D A AI+
Sbjct: 26 TVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIE 84
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+YV + E+ E L + F YG + ++I D T+K +GF FV ++D +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
++V + T + + + + +G I I V++DP TK+++GF FV E A++
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+YV + E+ E L + F YG + ++I D T+K +GF FV ++D +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 134
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 595 QLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
+ + +G I I V++DP TK+++GF FV E A++
Sbjct: 3 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+YV + E+ E L + F YG + ++I D T+K +GF FV ++D +
Sbjct: 78 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 134
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 595 QLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
+ + +G I I V++DP TK+++GF FV E A++
Sbjct: 3 EFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 44
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+YV + E+ E L + F YG + ++I D T+K +GF FV ++D +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
++V + T + + + + +G I I V++DP TK+++GF FV E A++
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+YV + E+ E L + F YG + ++I D T+K +GF FV ++D +
Sbjct: 116 LYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCV 172
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
++V + T + + + + +G I I V++DP TK+++GF FV E A++
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMK 82
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/71 (28%), Positives = 39/71 (54%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
T+YV N+ T+E +++LFG G + + + D K GF FV ++A +A+Q
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQN 97
Query: 466 LNGYTLNGQVL 434
++ ++ +V+
Sbjct: 98 ISNTRMDDRVI 108
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = -2
Query: 592 LFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVLSVSFKTQ 413
+F G + +++I + + +KGF FV M+ D+A A NG T+ G+ + V+ TQ
Sbjct: 1 MFEKVGPVVDVEIIFNE--RGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 58
Query: 412 K 410
+
Sbjct: 59 R 59
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV NI E L +F YG + S++++ + + +KGF FV + + A AL
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKARAAL 110
Query: 463 NGYTLNGQVLSVSFKTQKR 407
+ + G+++ V T R
Sbjct: 111 HESHVQGRIIEVRRATPTR 129
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V NI + L +F +G + +++I + + +KGF FV M +A A Q L
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQEL 212
Query: 463 NGYTLNGQVLSVSFKTQK 410
+G + G+ + V+ T +
Sbjct: 213 HGSMIEGRKIEVNCATAR 230
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/78 (26%), Positives = 40/78 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V NI + L +F +G + +++I + + +KGF FV M +A A Q L
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNE--RGSKGFGFVTMERPQDAERARQEL 212
Query: 463 NGYTLNGQVLSVSFKTQK 410
+G + G+ + V+ T +
Sbjct: 213 HGSMIEGRKIEVNCATAR 230
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+YV NI E L +F YG + S++++ + + +KGF FV + + A AL
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKARAAL 110
Query: 463 NGYTLNGQVLSVSFKTQKR 407
+ + G+++ V T R
Sbjct: 111 HESHVQGRIIEVRRATPTR 129
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V N+ E +E L +LF P+G I + KGFAF+ + A A +A+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 463 NGYTLNGQVLSVSF 422
+G ++G+ + V F
Sbjct: 171 DGRIIHGRQVRVRF 184
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.5 bits (78), Expect = 0.039
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V N+ E +E L +LF P+G I + KGFAF+ + A A +A+
Sbjct: 118 LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAKEAI 170
Query: 463 NGYTLNGQVLSVSF 422
+G ++G+ + V F
Sbjct: 171 DGRIIHGRQVRVRF 184
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+++ + +T + L F +G + VI+DP TK ++GF FV A A+
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+++ + +T + L F +G + VI+DP TK ++GF FV A A+
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
+++ + +T + L F +G + VI+DP TK ++GF FV A A+
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFV 509
+++ + +T L FG +G ++ V++DP TK+ +GF F+
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = -2
Query: 595 QLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVL 434
Q F YG ++ ++ D T++++GF FV + DE A + ++ + +NG+++
Sbjct: 152 QYFETYGKVEDAMLMFDKATQRHRGFGFVTF-DSDEVADKVCEIHFHEINGKMV 204
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFV 509
+++ + +T L FG +G ++ V++DP TK+ +GF F+
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Score = 34.3 bits (75), Expect = 0.091
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = -2
Query: 595 QLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVL 434
Q F YG ++ ++ D T++++GF FV + DE A + ++ + +NG+++
Sbjct: 152 QYFETYGKVEDAMLMFDKATQRHRGFGFVTF-DSDEVADKVCEIHFHEINGKMV 204
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I + E +LF YG++ S +++D T+ +KG FV +A A AL
Sbjct: 57 MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGAL 116
Query: 463 N 461
+
Sbjct: 117 H 117
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.28
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -2
Query: 610 ELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVL 434
E L F +G + I+V ++ T +KG+A+V A +A +++NGY + Q L
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNGYLMFEQRL 103
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 562 IKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVLSVSFKTQK 410
I ++ D ++ KGFA+V + AI LNG +VL V+ Q+
Sbjct: 41 IHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNRVLKVNRAQQR 91
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/80 (21%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
V++ N+ +T+E + + +G ID + K ++ +KG AFV+ EA+ I+ +
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 463 -NGYTLNGQVLSVSFKTQKR 407
+G ++ +++ + ++
Sbjct: 325 EDGVIIDNRLVKANLAIPRK 344
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMA 476
V+V + + E L F +G +D I+ D +TK + FAF+ E + A A
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I E L F YG + +V D +++GFAFV + +A+ A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL-AA 89
Query: 463 NGYTLNGQVLSV 428
T+ G+ + V
Sbjct: 90 REQTIKGKSVEV 101
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMA 476
V+V + + E L F +G +D I+ D +TK + FAF+ E + A A
Sbjct: 112 VFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
++V I E L F YG + +V D +++GFAFV + +A+ A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLAL-AA 89
Query: 463 NGYTLNGQVLSV 428
T+ G+ + V
Sbjct: 90 REQTIKGKSVEV 101
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -2
Query: 649 TTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQ 470
+ V+V I + + L+Q FG G D + + G+ FV A I
Sbjct: 96 SNVFVRGISRDMPDTELYQAFG--GITDGVV-----QCHVADGYGFVLFDTRANAQKKIV 148
Query: 469 ALNGYTLNGQVLSVSF 422
++G TLNG+++SVS+
Sbjct: 149 EMDGKTLNGKLISVSW 164
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -2
Query: 631 NIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQALNG 458
N+ E + QL P+ SI ++++ ++K++GFAFV R EA + + +G
Sbjct: 19 NLSSEQIRNLITQLAAPFEV--SIDIVENG-SRKHRGFAFVQCRSLAEANVLLAKFSG 73
>U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform a protein.
Length = 796
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -2
Query: 595 QLFGPYGAIDSIKVIKDPETKKN----KGFAFVNMREYDEAAMAIQALNGYTLNGQVLSV 428
+ FG YG I I P A+V + D+A AIQ ++ L+G+++
Sbjct: 129 EYFGRYGKIQKIVTSATPSLPAPHLPPSHTAYVTYKRVDDALRAIQGVHNSMLDGRLVKA 188
Query: 427 SFKTQK 410
S T K
Sbjct: 189 SLGTTK 194
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -2
Query: 652 QTTVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAI 473
Q T+++ ++ + E L Q+F G KV + + KG+ F+ +DEA +
Sbjct: 67 QRTLWIGDVPTDWTEETLSQVFTECGHAP-YKVKRVYVKDELKGYCFIEFITFDEARQTL 125
Query: 472 QALNGYTLNG 443
LNG + G
Sbjct: 126 YDLNGNRIPG 135
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/78 (24%), Positives = 37/78 (47%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
VY+ + + + F YG + + ++K+ GF FV+ ++ +A A+ L
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDV-IMKN-------GFGFVDFQDQRDADDAVHDL 55
Query: 463 NGYTLNGQVLSVSFKTQK 410
NG L G+ + + F +K
Sbjct: 56 NGKELCGERVILEFPRRK 73
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 535 KKNKGFAFVNMREYDEAAMAIQALNGYTLNGQVLSVSFKTQKRS 404
K+N A V +D+ A+ L G LNG+ L + +T+ RS
Sbjct: 146 KRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETRDRS 189
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -2
Query: 655 HQTTVYVYNIGEETEELALWQ-LFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAM 479
H+ TV++ + T L + L G YG + + + DPE K KG A V + +
Sbjct: 363 HRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVT---FSTSQA 419
Query: 478 AIQALNG 458
++A++G
Sbjct: 420 FVRAISG 426
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 514 FVNMREYDEAAMAIQALNGYTLNGQVLSVSF 422
F+N ++A ++ LNGY+ G +L+V F
Sbjct: 130 FLNFYRPEDALKVMKHLNGYSYRGHILAVRF 160
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = -2
Query: 646 TVYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQA 467
+V++ N+ + + + F G I + KD TKK K FA++ E+D+++ A
Sbjct: 56 SVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYI---EFDDSSSIENA 112
Query: 466 L--NGYTLNGQVLSVSFK 419
L NG + + V+ K
Sbjct: 113 LVMNGSLFRSRPIVVTAK 130
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+++ N+ L+++FG G I + D E K +KG + EA A+ L
Sbjct: 190 IFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGK-SKGVCVIQYTHPIEAVQAVSML 248
Query: 463 NGYTL 449
NG L
Sbjct: 249 NGQRL 253
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+Y+ + E + F YG I + + KN GF FV + +A A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL-------KN-GFGFVEFDDKRDAEDAVHDL 56
Query: 463 NGYTLNGQVLSVSFKTQKRSG 401
NG L G+ + + + + G
Sbjct: 57 NGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+Y+ + E + F YG I + + KN GF FV + +A A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL-------KN-GFGFVEFDDKRDAEDAVHDL 56
Query: 463 NGYTLNGQVLSVSFKTQKRSG 401
NG L G+ + + + + G
Sbjct: 57 NGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/81 (24%), Positives = 34/81 (41%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGFAFVNMREYDEAAMAIQAL 464
+Y+ + E + F YG I + + KN GF FV + +A A+ L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL-------KN-GFGFVEFDDKRDAEDAVHDL 56
Query: 463 NGYTLNGQVLSVSFKTQKRSG 401
NG L G+ + + + + G
Sbjct: 57 NGKELGGERVILDYSKPRGGG 77
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 643 VYVYNIGEETEELALWQLFGPYGAIDSIKVIKDPETKKNKGF 518
+++Y++ ++ + L F P+G I S KV D T +K F
Sbjct: 78 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCF 119
>AF025472-3|AAB71075.2| 843|Caenorhabditis elegans Hypothetical
protein ZK250.6 protein.
Length = 843
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 413 ETKRSVSADVVTPS-L*SS*AGCLNKEFSFQSQNIFVVEKGSYVHFRFSHISIFVR 249
E + S S+D+ L A C N F+ N ++G+ +HF FS ISI R
Sbjct: 206 EYRTSRSSDIYQDGFLIKDLALCRNDGVEFKKNNKCGQQRGNKIHFDFSSISISQR 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,599,471
Number of Sequences: 27780
Number of extensions: 331743
Number of successful extensions: 902
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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