Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_J12
(590 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 192 3e-50
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 191 6e-50
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 28 0.89
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 28 1.2
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 28 1.2
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 2.0
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 26 3.6
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 4.7
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 4.7
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 6.2
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 8.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.3
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 192 bits (468), Expect = 3e-50
Identities = 99/182 (54%), Positives = 120/182 (65%)
Frame = -2
Query: 562 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 383
MGI+RD HKR ATG KRA RKKRK+ELGR +NTR+GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 382 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 203
D+GNFSWGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 202 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGATRRAIPHGAFAGLRGEAPR 23
+G KG K T +S+ RK+ AR +KV+ A G + P
Sbjct: 121 MG-SKGKKATSTP-----NPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPG 174
Query: 22 DS 17
S
Sbjct: 175 QS 176
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 191 bits (466), Expect = 6e-50
Identities = 99/182 (54%), Positives = 120/182 (65%)
Frame = -2
Query: 562 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 383
MGI+RD HKR ATG KRA RKKRK+ELGR +NTR+GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 382 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 203
D+GNFSWGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 202 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGATRRAIPHGAFAGLRGEAPR 23
+G KG K T +S+ RK+ AR +KV+ A G + P
Sbjct: 121 MG-SKGKKATATP-----TPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPG 174
Query: 22 DS 17
S
Sbjct: 175 QS 176
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 28.3 bits (60), Expect = 0.89
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -2
Query: 550 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 377
RD +K + G K+ + EL +N + Q+ + S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 376 GNFSWGSECSTRKTRI 329
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.9 bits (59), Expect = 1.2
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = -2
Query: 469 PAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 290
P NT + PQ RSR T R+L +G S S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 289 RTKTLVKNAIVVVDATPFRQWYE 221
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 547 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALR 386
+ W K T K+ +KRK L R A RL + + S+ S+GG +A +
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAK 84
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 27.1 bits (57), Expect = 2.0
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = -2
Query: 547 DHWHKRRATGGKRAPIRKKRKY-----ELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 383
D W +A G +PIR+ ++Y + +PA R H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKFR---DNYHKQNKRNREAKERGIGI 814
Query: 382 DTGNFSWGSECSTRKTRIIDVVYNASNN 299
N S RK R + A NN
Sbjct: 815 KV-NSELKSAVEIRKARELKEKRLAKNN 841
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 3.6
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 364 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRK 191
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 190 K 188
+
Sbjct: 310 Q 310
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 4.7
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 574 DPTKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAAN 458
+ TK G + RRA A RKK K + GRP +N
Sbjct: 3 ETTKSGSKKSGQTSRRAIHSCLACRRKKLKCDHGRPCSN 41
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 225 YHCLNGVASTTTIAFLTRVFVRTNS 299
++C N V S T + + VFVR NS
Sbjct: 518 FYCSNEVLSLTALLSVPNVFVRPNS 542
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 303 LDALYTTSMIRVLRVEHSDPQEKLPVSRR 389
L+ + T S +V R H DP KLP RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 456 PGSVLSVSTPFVHVVEILSTVRCVWTPVTSLG 361
P VLS P++ + L + C+W P LG
Sbjct: 682 PILVLSTMKPYLCNITFLGSHLCIWQPKILLG 713
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 17 TVPGRLATQASKRPVWNCSSSRTLNLSKPLPCQVFSCCLLTSL 145
TVP +T ++ P+ S+S T S PLP SC TS+
Sbjct: 137 TVPPT-STSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSI 178
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 17 TVPGRLATQASKRPVWNCSSSRTLNLSKPLPCQVFSCCLLTSL 145
TVP +T ++ P+ S+S T S PLP SC TS+
Sbjct: 194 TVPPT-STSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSI 235
Score = 25.0 bits (52), Expect = 8.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 17 TVPGRLATQASKRPVWNCSSSRTLNLSKPLPCQVFSCCLLTSL 145
TVP +T ++ P+ S+S T S PLP SC TS+
Sbjct: 250 TVPPT-STSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSI 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,432,408
Number of Sequences: 5004
Number of extensions: 48288
Number of successful extensions: 160
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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