Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_J06
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0110 - 17357323-17357403,17357487-17357595,17357737-173579... 79 3e-15
04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036 34 0.11
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677... 32 0.45
04_04_0063 - 22441549-22442961 31 0.79
07_03_0538 + 19231318-19231382,19231652-19232390,19232468-192325... 30 1.8
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 29 2.4
03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-42... 29 2.4
01_06_0143 - 26916490-26917719 29 2.4
10_08_0529 - 18565749-18565804,18566022-18566128,18566206-185664... 28 5.6
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947... 28 5.6
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140... 28 5.6
10_08_1016 - 22262760-22264331 28 7.4
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 28 7.4
02_02_0350 + 9239138-9240218,9240755-9240906,9241392-9241457,924... 28 7.4
05_03_0532 - 15106553-15107362 27 9.7
04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189 27 9.7
>03_04_0110 -
17357323-17357403,17357487-17357595,17357737-17357906,
17358503-17358649,17358767-17358925,17359410-17359469,
17359659-17359705,17359786-17359888,17362640-17363080
Length = 438
Score = 79.0 bits (186), Expect = 3e-15
Identities = 44/101 (43%), Positives = 66/101 (65%)
Frame = -3
Query: 646 EAETARRKAIIEAXKEAHVAKIQYEQKIMEKESLQKIELIEDSIHKAKQQTKAEADFYHL 467
EAET ++ A+ EA K A V+KI EQK+MEK+S ++ + I++ + +
Sbjct: 333 EAETQKKIALSEAEKNAQVSKILMEQKLMEKDSSKRQQQIDNEM---------------I 377
Query: 466 KKQAEANKLLLTREYLELKKYEALSNNNKIYFGSDIPNMFL 344
K+AEAN+L LT EYLEL+ E+++NN+KI+FG IPNM +
Sbjct: 378 TKEAEANRLKLTPEYLELRFIESIANNSKIFFGEKIPNMIM 418
>04_04_0987 + 29938486-29938505,29938667-29938859,29938961-29941036
Length = 762
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = -3
Query: 646 EAETARRKAIIEAXKEAHVAKIQYEQKIMEKESLQ-KIELIEDSIHKAKQQTKAEADFYH 470
++ + +++ A KE ++K E E+LQ K+ +ED + K K+ DF+
Sbjct: 346 QSNILKGESLESAMKELDAKMTLLQEKESEIEALQDKVRSLEDEVAKQKE------DFHT 399
Query: 469 LKKQAEANKLLLTREYLELKKYEALSNNNKIYFGSDIPNMFLQANV 332
K+A+ +L + L+L+ E NN+KI S++ + Q N+
Sbjct: 400 ADKEADELRLEIEDLRLKLEAAEEDLNNDKI-ASSEMETLIEQKNM 444
>02_03_0199 + 16263549-16263644,16264941-16265899,16267140-16267791,
16267895-16267981,16268253-16268381,16269990-16270036,
16271337-16271438,16272720-16272843,16272981-16273028,
16273934-16274026,16274325-16274408,16274536-16274619,
16274751-16274819,16275531-16275590,16275946-16276017,
16276957-16277064,16278162-16278238,16278391-16278474,
16278617-16278728,16278778-16278810,16278811-16278900,
16279012-16279077,16279163-16279258,16279446-16279497,
16279723-16279775,16279998-16280018
Length = 1165
Score = 31.9 bits (69), Expect = 0.45
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 8/61 (13%)
Frame = +3
Query: 210 HTKIYFCMCARYTKCKYIF--------YLDNKGEVHSTFTPFKMGTLSPTFACKNMLGIS 365
H + YF C R+ KCKYI + E+ STFTP +G L P KN+ I
Sbjct: 977 HGEGYFIGCDRHPKCKYIARTLSVEVDETEASDEIQSTFTPRLLGVL-PDSDEKNVYDIL 1035
Query: 366 L 368
L
Sbjct: 1036 L 1036
>04_04_0063 - 22441549-22442961
Length = 470
Score = 31.1 bits (67), Expect = 0.79
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = -3
Query: 574 EQKIMEKESLQKIELIEDSIHKAKQ-QTKAEADFYHLKKQAEANKLLLTREYLEL 413
E+ EK++ +K++L++ + KAK+ + K + KQ E K+ L LE+
Sbjct: 10 EELRKEKDAAEKVQLLQREVEKAKESERKMLESLIYQTKQLEQTKISLEEAKLEI 64
>07_03_0538 +
19231318-19231382,19231652-19232390,19232468-19232516,
19232600-19232664,19232774-19232828,19234107-19234225,
19234346-19234412,19235316-19235437,19235521-19235790
Length = 516
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = -3
Query: 634 ARRKAIIEAXKEAHVAKIQYEQKIMEKESLQKIELIEDSIHKAKQQTKAEAD-FYHLKKQ 458
A++KA+++ K+ AK+Q E++ +EK ++ IE + A+ + + D +K++
Sbjct: 356 AQQKALLDHGKKIDPAKLQLEKERLEKRQQEEKARIEAQVKAAEAAAQLKLDEEMRMKRE 415
Query: 457 AEANKLLLTREYLELKKYEALSNNNKIYFGSDIPNM 350
E L +KK + N++ F D+ N+
Sbjct: 416 QERRAARLALHM--MKKTVDIDNSD---FLKDLENL 446
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = -3
Query: 622 AIIEAXKEAHVAKIQYEQKIMEKESLQK-IELIEDSIHKAKQQT---KAEADFYHLKKQA 455
A IEA + A ++K+ E+K E L++ +E +E +I +++ K E Y + K++
Sbjct: 1474 ASIEARQAAEISKVYAEEKEEEVRILERSVEELESTITVLEEEVCNLKEEVRSYQIYKKS 1533
Query: 454 EANK 443
EA +
Sbjct: 1534 EAEQ 1537
>03_01_0049 + 418957-419040,419599-419796,419918-420040,420172-420209,
420334-420502,421115-424273,424367-424485,424915-425116
Length = 1363
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = -3
Query: 625 KAIIEAXKEAHVAKIQ-YEQKI--MEKESLQKIELIEDSIHKAKQ-QTKAEADFYHLKKQ 458
K +EA + A+++ YE ++ + KES KI+ + DS++ +KQ + AD H+KK
Sbjct: 1013 KVKLEASLQDVSAQLRHYESQLEDLRKESKSKIKGLVDSLNASKQSEEMLAADAEHMKKL 1072
Query: 457 AEANK 443
E K
Sbjct: 1073 MEDAK 1077
>01_06_0143 - 26916490-26917719
Length = 409
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 319 GHFHQHLLVRTCWVYHFQSKSYYCWRALHISSTPNI 426
G H+L+RT V+ S YC A H+SS NI
Sbjct: 144 GFTRHHMLIRTV-VFSCPPTSPYCIAAAHVSSASNI 178
>10_08_0529 -
18565749-18565804,18566022-18566128,18566206-18566410,
18566500-18566812
Length = 226
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 475 KSQLLPLS-VVWPCEYCLQ*VQFS 543
K +L+P+S +V CEYCL+ QFS
Sbjct: 203 KDRLIPVSAIVADCEYCLKVSQFS 226
>03_03_0246 +
15789635-15794227,15794314-15794555,15794630-15794771,
15796089-15796272,15796349-15796696,15796753-15797450,
15798208-15798900
Length = 2299
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = -3
Query: 640 ETARRKAIIEAXKEAHVAKIQYEQKIMEKESLQKIELIEDSIHKAKQQTKAEADFYHLKK 461
E AR A + + AK EQ+I +E +K + E+ + ++ E + ++
Sbjct: 521 EEARHAAWLAEQERLEAAKRAEEQRIAREEEKRKAAIEEERRKEGARKKLQELEARIARR 580
Query: 460 QAEAN 446
QAE+N
Sbjct: 581 QAESN 585
>02_05_1219 +
35011571-35011897,35012008-35013780,35013915-35014068,
35014158-35014801
Length = 965
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 505 KQQTKAEADFYHLKKQAEANKLLLTREYLELKKYEALSNNNKIYFG-SDIPNMFLQANVG 329
K+ T F K+ A KLL T+E+ E ++ LS+N ++ D PN L N
Sbjct: 242 KRMTLVREKFAEAKRLATDEKLLHTKEFQEALQF--LSSNKDLFLKFLDEPNPLLSHNNY 299
Query: 328 ESVP 317
E P
Sbjct: 300 EFQP 303
>10_08_1016 - 22262760-22264331
Length = 523
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -3
Query: 547 LQKIELIEDSIHKAKQQTKAEADFY-HLKKQAEANKLLLTREYLELKKYEALSNNNKIYF 371
L+++ + ED+++KAK + + AD Y + E N + R ++L K E +
Sbjct: 428 LKRLPMEEDAVNKAKGELEKRADEYEEFLRDLEHNSDI--RFQIDLYKDEDYRSEMASTI 485
Query: 370 GSDIPNM 350
G D+P +
Sbjct: 486 GDDVPTV 492
>02_05_0702 -
31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/59 (27%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = -3
Query: 625 KAIIEAXKEAHVAKIQYEQKI-MEKESLQKIELIEDSIHKAKQQTKAEADFYHLKKQAE 452
+ +I+A E H+ +++ E K +EKE+ K +L ++ + ++ K E+D + +K +E
Sbjct: 303 EGVIKAL-ETHLTQVEDEYKEKLEKETSAKRDLEMEATYLKQKLEKCESDLENTRKSSE 360
>02_02_0350 +
9239138-9240218,9240755-9240906,9241392-9241457,
9242715-9242951
Length = 511
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +1
Query: 25 PNLQISVKIFKCISIFCLNTCLQMWFPSVHLLSFSQATALSAXP 156
PN + + F S+ C +WFP++ L + LS P
Sbjct: 211 PNFSVLLLPFSKCSVICTQDINTVWFPNLCSLEIRNCSKLSLPP 254
>05_03_0532 - 15106553-15107362
Length = 269
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -3
Query: 619 IIEAXKEAHVAKIQYEQKIMEKESLQKIELIEDSIHKAKQQTKAEADFYHLK 464
++EA AH+ Q ++ M + +L+ +EL ++++ K EA + LK
Sbjct: 138 MVEAYDAAHIDFHQMVRRGMVENNLKILELRQENLQLKKDLDAVEAQLHQLK 189
>04_03_0695 + 18790491-18790565,18791299-18791427,18792981-18794189
Length = 470
Score = 27.5 bits (58), Expect = 9.7
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = -3
Query: 598 AHVAKIQYEQKIMEKESLQKIELIEDSIHKAKQQTKAEADFYHLKKQAEANKLLLTR-EY 422
+HV K+ EQK ESL+K + E K+KQ+ K ++ + ++ K R E
Sbjct: 134 SHVRKLIKEQKSEGIESLKKQLVQEMESWKSKQKEKVANALQYIVSELDSEKKSRRRAER 193
Query: 421 LELKKYEALSN 389
+ K AL+N
Sbjct: 194 INKKLGMALAN 204
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,003,133
Number of Sequences: 37544
Number of extensions: 267805
Number of successful extensions: 744
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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