Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_J03
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical pr...   210   5e-55
Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical pr...   201   4e-52
U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein ...   201   4e-52
Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical pr...   132   2e-31
Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical pr...    82   3e-16
Z78062-5|CAB01500.1|  516|Caenorhabditis elegans Hypothetical pr...    27   8.8  
AL021571-7|CAA16515.1|  516|Caenorhabditis elegans Hypothetical ...    27   8.8  

>Z66564-2|CAA91474.1|  248|Caenorhabditis elegans Hypothetical
           protein F52D10.3a protein.
          Length = 248

 Score =  210 bits (514), Expect = 5e-55
 Identities = 101/126 (80%), Positives = 113/126 (89%), Gaps = 2/126 (1%)
 Frame = -3

Query: 653 MKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 474
           MKGD YRYLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YE
Sbjct: 123 MKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYE 182

Query: 473 ILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE-- 300
           ILN+PDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD   D  +  
Sbjct: 183 ILNAPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTDAN 242

Query: 299 PAEGGD 282
             EGG+
Sbjct: 243 ETEGGN 248


>Z73910-2|CAA98138.1|  248|Caenorhabditis elegans Hypothetical
           protein M117.2 protein.
          Length = 248

 Score =  201 bits (490), Expect = 4e-52
 Identities = 100/122 (81%), Positives = 108/122 (88%)
 Frame = -3

Query: 653 MKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 474
           MKGD YRYLAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYE
Sbjct: 123 MKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYE 181

Query: 473 ILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPA 294
           ILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G  D+  
Sbjct: 182 ILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQ 240

Query: 293 EG 288
           EG
Sbjct: 241 EG 242


>U05038-1|AAA61872.1|  248|Caenorhabditis elegans 14-3-3 protein
           protein.
          Length = 248

 Score =  201 bits (490), Expect = 4e-52
 Identities = 100/122 (81%), Positives = 108/122 (88%)
 Frame = -3

Query: 653 MKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 474
           MKGD YRYLAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYE
Sbjct: 123 MKGDYYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYE 181

Query: 473 ILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPA 294
           ILN+P+ ACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD  G  D+  
Sbjct: 182 ILNTPEHACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQ 240

Query: 293 EG 288
           EG
Sbjct: 241 EG 242


>Z66564-5|CAC42300.2|  198|Caenorhabditis elegans Hypothetical
           protein F52D10.3b protein.
          Length = 198

 Score =  132 bits (319), Expect = 2e-31
 Identities = 60/74 (81%), Positives = 70/74 (94%)
 Frame = -3

Query: 653 MKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 474
           MKGD YRYLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YE
Sbjct: 123 MKGDYYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYE 182

Query: 473 ILNSPDKACQLAKQ 432
           ILN+PDKACQLAKQ
Sbjct: 183 ILNAPDKACQLAKQ 196


>Z73910-3|CAA98135.1|  125|Caenorhabditis elegans Hypothetical
           protein M117.3 protein.
          Length = 125

 Score = 82.2 bits (194), Expect = 3e-16
 Identities = 52/127 (40%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
 Frame = -3

Query: 653 MKGDXYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 474
           M  D +RYL +      R      S+ AYQ+A  I+K KMQPTHPIRLGLALN S   ++
Sbjct: 1   MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59

Query: 473 ILNSPDKACQLAKQAFDDAIAELDTLNE--DSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 300
           +LN P +A ++A+ A D A  EL+ +    DSY  S L       +L   T + + DG E
Sbjct: 60  VLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRARTLYDLLKSTHEQRVDGKE 119

Query: 299 PAEGGDN 279
             E  DN
Sbjct: 120 -GEEADN 125


>Z78062-5|CAB01500.1|  516|Caenorhabditis elegans Hypothetical
           protein F16D3.7 protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 523 CVGCIFALLISKASWYAFCESSTTECLVS 609
           C GC+  + I  ASW  +C S     + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395


>AL021571-7|CAA16515.1|  516|Caenorhabditis elegans Hypothetical
           protein F16D3.7 protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 523 CVGCIFALLISKASWYAFCESSTTECLVS 609
           C GC+  + I  ASW  +C S     + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,982,678
Number of Sequences: 27780
Number of extensions: 272797
Number of successful extensions: 818
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 816
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)