Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_J02
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate |Schizosacc... 82 9e-17
SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|... 29 0.48
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 29 0.48
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 28 1.1
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 28 1.1
SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family |Schizos... 28 1.5
SPBPB2B2.17c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 5.9
SPAC977.02 |||S. pombe specific 5Tm protein family|Schizosacchar... 26 5.9
SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual 26 5.9
SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 5.9
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 25 7.9
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 25 7.9
>SPAC26F1.06 |gpm1||monomeric 2,3-bisphosphoglycerate
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 211
Score = 81.8 bits (193), Expect = 9e-17
Identities = 39/77 (50%), Positives = 54/77 (70%)
Frame = -1
Query: 622 PMYESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKHLDDLSDAAIMELNL 443
P ESLK T ER LPY+ + IVP I +G+K++IAAHGNSLR ++ L+ L+ I++ L
Sbjct: 128 PNGESLKDTAERVLPYYKSTIVPHILKGEKVLIAAHGNSLRALIMDLEGLTGDQIVKREL 187
Query: 442 PTGIPFVYELDENLKPV 392
TG+P VY LD++ K V
Sbjct: 188 ATGVPIVYHLDKDGKYV 204
>SPAC2E1P3.04 |||copper amine oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 712
Score = 29.5 bits (63), Expect = 0.48
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -3
Query: 590 KNPTLLEQCYCASDQRRQEDH-YCCPW 513
K+P ++EQC + Q DH YC PW
Sbjct: 133 KDPAVIEQCILSGVPPDQMDHVYCDPW 159
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 29.5 bits (63), Expect = 0.48
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 86 YLKIIMATLNKKSNKSKAYSFLN*IYCIVLKILICIKHIWYLC 214
Y +++ N + KA+S+ + + C I +C HI YLC
Sbjct: 649 YRELMEDAENWQCQHCKAFSYFSQVACSCKSITVCPLHIEYLC 691
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 28.3 bits (60), Expect = 1.1
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = -1
Query: 646 ADPKPEEFPMYESLKLTIERTLPYWNNVIVPQIKEGKKIIIA-AHGNSLRGIVKHLDDLS 470
A+P E P Y++L + T Y +P+ K+GK A S + I H
Sbjct: 98 AEPIEESSPSYQALSSMAKDTKTYLFGGSIPERKDGKLYNTAMVFDPSGKLIAVH----R 153
Query: 469 DAAIMELNLPTGIPFVYELDENLKPVDSMVFLGDE 365
+ ++++P G+ F ++L P D+M + E
Sbjct: 154 KIHLFDIDIPGGVSF--RESDSLSPGDAMTMVDTE 186
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = -1
Query: 607 LKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKHLDDLSDAAIME 452
++L + +TLP+ N I+ +E K +I + GN I + D +D E
Sbjct: 1 MQLKLTKTLPFSENFIMADSEEYKTVIGISFGNQNSSIAFNRDGKTDVLANE 52
>SPAC1687.21 ||SPAC222.01|phosphoglycerate mutase family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 209
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -1
Query: 613 ESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKH 485
E L R L +W+ +VP + K +I+ HG + + H
Sbjct: 110 EGLSHLTSRLLKFWDEYVVPLQGKKKCVIVLCHGGVINVLRTH 152
>SPBPB2B2.17c |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 161 YCIVLKILICIKHIWYLCIE 220
YC+ +K+LI + + WY+ E
Sbjct: 42 YCLAVKLLIYLLYCWYIYSE 61
>SPAC977.02 |||S. pombe specific 5Tm protein
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 161 YCIVLKILICIKHIWYLCIE 220
YC+ +K+LI + + WY+ E
Sbjct: 42 YCLAVKLLIYLLYCWYIYSE 61
>SPBC1348.03 |||dubious|Schizosaccharomyces pombe|chr 2|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 161 YCIVLKILICIKHIWYLCIE 220
YC+ +K+LI + + WY+ E
Sbjct: 42 YCLAVKLLIYLLYCWYIYSE 61
>SPAC750.04c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 146
Score = 25.8 bits (54), Expect = 5.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 161 YCIVLKILICIKHIWYLCIE 220
YC+ +K+LI + + WY+ E
Sbjct: 42 YCLAVKLLIYLLYCWYIYSE 61
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/51 (23%), Positives = 27/51 (52%)
Frame = +3
Query: 399 FKFSSSSYTKGMPVGRFNSMIAASLRSSKCFTIPLRLLPWAAIMIFLPSLI 551
F + Y + + +S + ++ + KCF + +L +AI++FL S++
Sbjct: 660 FSNLETCYESAKAIVQLSSKLLSAGQMDKCFYLEFEILYCSAIVLFLFSVM 710
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3
Query: 341 CCRCPGQGQVIFFVSKCFRYGYSLNT 264
C CP Q FF+SK YS+ T
Sbjct: 231 CVSCPFQIPGHFFISKSLALSYSIKT 256
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,645,305
Number of Sequences: 5004
Number of extensions: 52459
Number of successful extensions: 135
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 135
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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