Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_J02
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.0  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.0  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   4.0  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   5.2  
AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...    24   5.2  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 477  SSKCFTIPLRLLPW 518
            S++CF   LRLLPW
Sbjct: 1034 STQCFKERLRLLPW 1047


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -1

Query: 649 AADPKPEEFPMYESLKLTIERTLPY----WNNVIVPQI 548
           A DP  E   + E L++     LPY      N++VPQ+
Sbjct: 247 ATDPTMERLSLEEKLRVLFYEFLPYLAIVCMNLVVPQL 284


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = -1

Query: 649 AADPKPEEFPMYESLKLTIERTLPYWNNVIVPQIKEGKKIIIAAHGNSLRGIVKHLDDL 473
           A+  +  E P   S K  +ER   Y NN+ +  +++G   +IA     +  ++K + +L
Sbjct: 35  ASKAEENEAPRKVSHKAQLERFKNYANNLEIEDLRDG---MIAQMIEFMESMIKEMSEL 90


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = +3

Query: 231  GTEGRLIYFPGGVQRVTISKTLGNK 305
            G   + +  PGG  RVTI    G K
Sbjct: 1827 GFHHKAVQLPGGAVRVTIENAKGKK 1851


>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 532 IIIAAHGN-SLRGIVKHLDDLSDAAIMEL-NLPTGIPFVYELDENLK 398
           I + A+ N S R   K    ++   +M + N PT     Y LD+NLK
Sbjct: 4   ITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLK 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,331
Number of Sequences: 2352
Number of extensions: 13428
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)