Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_I19
         (602 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0284 + 11599390-11600007,11600109-11600153,11600343-116005...    32   0.40 
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157...    30   1.6  
08_02_0955 + 22994266-22995630                                         29   2.1  
06_03_1011 - 26882011-26882157,26882576-26884248,26884607-268847...    29   2.8  
12_02_0132 - 14054331-14054969                                         28   6.5  
04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467           28   6.5  
06_03_0232 - 18507872-18508792                                         27   8.7  
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426...    27   8.7  
03_05_1122 + 30546314-30549277,30549615-30549693,30549857-305499...    27   8.7  

>05_03_0284 +
           11599390-11600007,11600109-11600153,11600343-11600550,
           11600645-11600726,11601894-11602398
          Length = 485

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = -1

Query: 197 SNRNALLLHG-----GNRPGWWYLPVRTHKRSYHQ**YCVIIGGFCETPTVTRRYM 45
           SN + L L G     GN  GWW LP + H+           + G C++PT+ R +M
Sbjct: 177 SNLDGLTLRGAGTIEGNGEGWWNLPCKPHRGPNGS-----TLRGPCDSPTLVRFFM 227


>01_07_0197 + 41912207-41912652,41913226-41913800,41913828-41915748,
            41915836-41916049,41916143-41916394,41916469-41916528,
            41916646-41916776,41916898-41917012,41917084-41917239
          Length = 1289

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 541  CSKHRGRHNPERPKTPPNYWNPRWNVPEDTEEL 443
            C  H     PE    P N  NP+W VP+D  EL
Sbjct: 1015 CGNHYEMQTPETRARPENP-NPKWPVPKDLIEL 1046


>08_02_0955 + 22994266-22995630
          Length = 454

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 523 RHNPERPKTPPNYWNPR 473
           +H+PE+ K PP  WNP+
Sbjct: 180 QHSPEQHKRPPRVWNPQ 196


>06_03_1011 -
           26882011-26882157,26882576-26884248,26884607-26884783,
           26885313-26885416,26885896-26886032
          Length = 745

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 505 PKTPPNYWNPRWNVPEDTEE 446
           P  PPNYW   W + + +EE
Sbjct: 434 PLNPPNYWEETWKILQMSEE 453


>12_02_0132 - 14054331-14054969
          Length = 212

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = -1

Query: 503 QNPAELLEPEVERTRGHGGTQSNEQC--CVDYCIRGEGV 393
           Q   E   P  E ++G GG    EQC  C+    RGE V
Sbjct: 130 QEDVEAAIPAFEYSKGSGGAAEAEQCAVCIGVVRRGETV 168


>04_01_0348 + 4563391-4563689,4563965-4564145,4564186-4564467
          Length = 253

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 280 RHLQRKCATHLEM*VLRPQYSYNGCPTLQTETHYCFTAEIDRGG 149
           RHLQ    T +    L+P +S   CP +  +T+  F   + RGG
Sbjct: 206 RHLQMVDITDIRFASLQPHHS---CPCISPDTNVTFYPAMTRGG 246


>06_03_0232 - 18507872-18508792
          Length = 306

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -2

Query: 526 GRHNPERPKTPPN 488
           GRHNP RP+ PP+
Sbjct: 136 GRHNPFRPRAPPS 148


>03_06_0704 +
           35641774-35642031,35642122-35642446,35642546-35642699,
           35643662-35643706,35644121-35644180,35644532-35644694,
           35645356-35645717,35645985-35646303
          Length = 561

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 556 KKIEECSKHRGRHNPERPKTPPNYWNPRWNVPEDTEE 446
           KK+ E      R+   +P  PP + +P+ ++P  T +
Sbjct: 92  KKLAEAQDRLARYRDRKPPPPPTHRDPKPSLPPTTTQ 128


>03_05_1122 +
           30546314-30549277,30549615-30549693,30549857-30549945,
           30550422-30550538,30550873-30551111,30552279-30552365,
           30552732-30552831,30553319-30553532,30553617-30553777
          Length = 1349

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -3

Query: 180 TASRRK*TGVVVPTRA-DSQEVLPPVIILRNHWR 82
           T  RR  +G VVP +  DS E   P+I+ +NH R
Sbjct: 594 TCVRRTRSGGVVPKKQEDSSESEEPIILRKNHQR 627


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,505,673
Number of Sequences: 37544
Number of extensions: 416908
Number of successful extensions: 1063
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)