Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_I19
         (602 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p pro...    30   2.1  
AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA...    30   2.1  
AY071347-1|AAL48969.1|  493|Drosophila melanogaster RE38504p pro...    29   6.4  
AE014296-3366|AAF51600.2|  493|Drosophila melanogaster CG5872-PA...    29   6.4  
L02106-2|AAA99872.1|  465|Drosophila melanogaster ribonucleoprot...    28   8.5  
BT010070-1|AAQ22539.1| 1038|Drosophila melanogaster LD13052p pro...    28   8.5  
AE014298-1590|AAF48025.3| 1028|Drosophila melanogaster CG11759-P...    28   8.5  
AE014297-4008|AAX52998.1|  465|Drosophila melanogaster CG6354-PG...    28   8.5  
AE014297-4007|AAX52997.1|  465|Drosophila melanogaster CG6354-PC...    28   8.5  
AE014297-4006|AAN14092.1|  465|Drosophila melanogaster CG6354-PA...    28   8.5  

>AY118465-1|AAM49834.1|  298|Drosophila melanogaster GM02257p
           protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 551 DRRMLEAQRTAQPRTTQNPAELLEPEVERTRGHG 450
           D R L AQ   QPR    P E+L PE    RGHG
Sbjct: 15  DWRDLAAQTEEQPRV-YTPGEVLMPEAGFMRGHG 47


>AE013599-3629|AAF47028.1|  298|Drosophila melanogaster CG3931-PA
           protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -1

Query: 551 DRRMLEAQRTAQPRTTQNPAELLEPEVERTRGHG 450
           D R L AQ   QPR    P E+L PE    RGHG
Sbjct: 15  DWRDLAAQTEEQPRV-YTPGEVLMPEAGFMRGHG 47


>AY071347-1|AAL48969.1|  493|Drosophila melanogaster RE38504p
           protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 523 RHNPERPKTPPNYWNP 476
           RH   R  TPP +WNP
Sbjct: 454 RHEDARSSTPPGFWNP 469


>AE014296-3366|AAF51600.2|  493|Drosophila melanogaster CG5872-PA
           protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 523 RHNPERPKTPPNYWNP 476
           RH   R  TPP +WNP
Sbjct: 454 RHEDARSSTPPGFWNP 469


>L02106-2|AAA99872.1|  465|Drosophila melanogaster ribonucleoprotein
           protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 75  AEPANDYAILSLVVGPLVSPHG*VPPPRSISAV 173
           A P N Y       GPL  P+G VPPP    AV
Sbjct: 415 AGPPNSYPYTGYNAGPL-PPNGSVPPPTGAKAV 446


>BT010070-1|AAQ22539.1| 1038|Drosophila melanogaster LD13052p
           protein.
          Length = 1038

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 463 PEDTEELNRMNNAV*IIASVVKESSRYIIGTTKIIFIYLFYCLDGWTSSQP 311
           P++ EEL +    +  ++ V++E  R  +  +  I IY+F+C   +T   P
Sbjct: 295 PDNLEELEKNEACLSALSRVLREDWRKSLDLSTNI-IYIFFCFSTYTKFHP 344


>AE014298-1590|AAF48025.3| 1028|Drosophila melanogaster CG11759-PA
           protein.
          Length = 1028

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -2

Query: 463 PEDTEELNRMNNAV*IIASVVKESSRYIIGTTKIIFIYLFYCLDGWTSSQP 311
           P++ EEL +    +  ++ V++E  R  +  +  I IY+F+C   +T   P
Sbjct: 295 PDNLEELEKNEACLSALSRVLREDWRKSLDLSTNI-IYIFFCFSTYTKFHP 344


>AE014297-4008|AAX52998.1|  465|Drosophila melanogaster CG6354-PG,
           isoform G protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 75  AEPANDYAILSLVVGPLVSPHG*VPPPRSISAV 173
           A P N Y       GPL  P+G VPPP    AV
Sbjct: 415 AGPPNSYPYTGYNAGPL-PPNGSVPPPTGAKAV 446


>AE014297-4007|AAX52997.1|  465|Drosophila melanogaster CG6354-PC,
           isoform C protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 75  AEPANDYAILSLVVGPLVSPHG*VPPPRSISAV 173
           A P N Y       GPL  P+G VPPP    AV
Sbjct: 415 AGPPNSYPYTGYNAGPL-PPNGSVPPPTGAKAV 446


>AE014297-4006|AAN14092.1|  465|Drosophila melanogaster CG6354-PA,
           isoform A protein.
          Length = 465

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/33 (45%), Positives = 16/33 (48%)
 Frame = +3

Query: 75  AEPANDYAILSLVVGPLVSPHG*VPPPRSISAV 173
           A P N Y       GPL  P+G VPPP    AV
Sbjct: 415 AGPPNSYPYTGYNAGPL-PPNGSVPPPTGAKAV 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,837,303
Number of Sequences: 53049
Number of extensions: 705072
Number of successful extensions: 1917
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)