Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_I19
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81588-1|CAB04716.1|  281|Caenorhabditis elegans Hypothetical pr...    29   3.4  
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork head/HNF-3...    28   5.9  

>Z81588-1|CAB04716.1|  281|Caenorhabditis elegans Hypothetical
           protein T07D10.1 protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 313 PTWC*VVTGAHRHLQRKCATHLEM*VLRPQYSYNGCPTLQTETHYCF 173
           PTWC  VTGA  H + +C          P   Y  CPT+ +E HY +
Sbjct: 113 PTWC-SVTGARFH-EFQCT---------PPAPYCPCPTILSEFHYTY 148


>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical protein
            ZK688.5a protein.
          Length = 1620

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 554  EDRRMLE--AQRTAQPRTTQNPAELLEPEVERTRGHGGTQSNEQCCVD 417
            E R++L   A  ++QP T+ +    +     R R H G++ +   CVD
Sbjct: 1529 ESRQLLPTIASTSSQPSTSSSSLNTVSTNNPRKRNHDGSREDNDDCVD 1576


>Z92833-5|CAK12560.1|  411|Caenorhabditis elegans Hypothetical
           protein F38A6.1c protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 196 QTETHYCFTAEIDRGGGTYPCGLTRGPTTSDNIA*SLAGSA 74
           Q  ++Y   A   +GGG  P G T G T +   A S+A S+
Sbjct: 43  QLGSNYISPANFMQGGGISPLGFTTGTTGATTAAASVATSS 83


>Z92833-4|CAK12559.1|  442|Caenorhabditis elegans Hypothetical
           protein F38A6.1b protein.
          Length = 442

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 196 QTETHYCFTAEIDRGGGTYPCGLTRGPTTSDNIA*SLAGSA 74
           Q  ++Y   A   +GGG  P G T G T +   A S+A S+
Sbjct: 74  QLGSNYISPANFMQGGGISPLGFTTGTTGATTAAASVATSS 114


>Z92833-3|CAB07378.1|  506|Caenorhabditis elegans Hypothetical
           protein F38A6.1a protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 196 QTETHYCFTAEIDRGGGTYPCGLTRGPTTSDNIA*SLAGSA 74
           Q  ++Y   A   +GGG  P G T G T +   A S+A S+
Sbjct: 138 QLGSNYISPANFMQGGGISPLGFTTGTTGATTAAASVATSS 178


>U51163-1|AAA96319.1|  506|Caenorhabditis elegans fork
           head/HNF-3-like protein protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 196 QTETHYCFTAEIDRGGGTYPCGLTRGPTTSDNIA*SLAGSA 74
           Q  ++Y   A   +GGG  P G T G T +   A S+A S+
Sbjct: 138 QLGSNYISPANFMQGGGISPLGFTTGTTGATTAAASVATSS 178


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,255,211
Number of Sequences: 27780
Number of extensions: 337005
Number of successful extensions: 781
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)