Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_I19
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.7  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    23   3.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.0  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 182 LLLHGGNRPGWWYLPVRTHKRS 117
           L+    +RP WW+    +H+ S
Sbjct: 19  LIFVTSHRPAWWFWTATSHEAS 40


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 136 TGRYHHPGLFPP 171
           TGR H P  FPP
Sbjct: 398 TGREHDPAKFPP 409


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 515 PRTTQNPAELLEPEVERTRGHGGTQSNEQ 429
           PR+   P+ + +   E T G GGT S+ +
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRR 294


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 515 PRTTQNPAELLEPEVERTRGHGGTQSNEQ 429
           PR+   P+ + +   E T G GGT S+ +
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRR 294


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 515 PRTTQNPAELLEPEVERTRGHGGTQSNEQ 429
           PR+   P+ + +   E T G GGT S+ +
Sbjct: 266 PRSHAKPSLIDDEPTEVTIGGGGTTSSRR 294


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,804
Number of Sequences: 438
Number of extensions: 4529
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)