Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_I13
         (393 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0727 - 31517592-31518600,31519999-31520225                       28   2.3  
07_01_1086 - 9930311-9931993                                           27   4.1  
05_03_0216 + 10370531-10371922,10378656-10378808                       27   4.1  
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603...    27   5.4  
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985...    27   7.1  
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574...    27   7.1  
07_01_1081 + 9831606-9832499                                           27   7.1  
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464...    26   9.4  

>01_06_0727 - 31517592-31518600,31519999-31520225
          Length = 411

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 137 SLFGXTRYISAIEKL*XAVTKFGS 66
           SL G  RYI A+E L  AV +FGS
Sbjct: 190 SLKGSVRYIGALEALKTAVERFGS 213


>07_01_1086 - 9930311-9931993
          Length = 560

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 290 VCKRTNYKNEKPLSLLLPLEI 228
           VC+R   +++KP SLL PL+I
Sbjct: 174 VCQRVKAEHQKPASLLQPLKI 194


>05_03_0216 + 10370531-10371922,10378656-10378808
          Length = 514

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -2

Query: 290 VCKRTNYKNEKPLSLLLPLEI 228
           VC+R   +++KP SLL PL+I
Sbjct: 160 VCQRVKAEHQKPASLLQPLKI 180


>03_06_0759 -
           36059872-36059928,36059934-36060125,36060241-36060348,
           36060440-36060712,36060923-36061009,36061085-36061276,
           36061841-36061969,36062087-36062200,36062446-36062490,
           36062785-36062956,36063229-36063515,36063989-36064456
          Length = 707

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +2

Query: 269 YNLFVYKHVTIYLHFLCNENQILILDY 349
           +NLF+Y  VT+++  L NE  ++I+ Y
Sbjct: 547 FNLFMYFVVTMFMCLLANEALMMIVAY 573


>07_03_1512 + 27288779-27289222,27298101-27298399,27298499-27298589,
            27298701-27298766,27299151-27302660,27311604-27312224
          Length = 1676

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 299  LLHVCKRTNYKNEKPLSLLLPLEI 228
            L  VC+R   +++KP  LL PL+I
Sbjct: 1388 LCDVCQRVKAEHQKPAGLLQPLKI 1411


>07_01_1133 -
           10550799-10551137,10552195-10552254,10555693-10557401,
           10557534-10557616,10577533-10578074
          Length = 910

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 299 LLHVCKRTNYKNEKPLSLLLPLEI 228
           L  VC+R   +++KP  LL PL+I
Sbjct: 443 LCDVCQRVKAEHQKPAGLLQPLKI 466


>07_01_1081 + 9831606-9832499
          Length = 297

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 299 LLHVCKRTNYKNEKPLSLLLPLEI 228
           L  VC+R   +++KP  LL PL+I
Sbjct: 76  LCDVCQRVKAEHQKPAGLLQPLKI 99


>08_02_0502 +
           17844775-17845092,17845528-17845634,17846039-17846492,
           17846623-17846694,17846804-17846925,17847079-17847294,
           17847392-17847500,17847618-17847730,17847916-17848063,
           17848274-17848396
          Length = 593

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +2

Query: 317 CNENQILILDYPVRSLN 367
           C EN IL+++YP+R ++
Sbjct: 345 CRENNILMVNYPIREVD 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,770,816
Number of Sequences: 37544
Number of extensions: 146082
Number of successful extensions: 230
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)