Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_I11
         (567 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   8.6  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.6  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -1

Query: 279 ICVSAIFFV*KYVLTNFWTVVD 214
           +C++A     + VLT  W +++
Sbjct: 628 VCIAAALIALQIVLTLVWMIIE 649


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = +3

Query: 81  YVSVAIRLQREVVMSIV 131
           ++SVA +LQ+E+  SI+
Sbjct: 162 HISVAQKLQKEIPNSII 178


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -1

Query: 279 ICVSAIFFV*KYVLTNFWTVVD 214
           +C++A     + VLT  W +++
Sbjct: 718 VCIAAALIALQIVLTLVWMIIE 739


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,395
Number of Sequences: 438
Number of extensions: 2478
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16440594
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)