Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_I09
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 28 1.2
SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces ... 28 1.2
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.0
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 27 2.7
SPBC16E9.18 ||SPBC1E8.01|phosphatidylserine decarboxylase|Schizo... 27 3.6
SPAC22F8.07c |rtf1||replication termination factor Rtf1|Schizosa... 27 3.6
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 26 4.7
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 26 6.2
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 26 6.2
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 25 8.2
SPAC6G9.04 |mug79||meiotically upregulated gene Mug79|Schizosacc... 25 8.2
SPAC977.15 |||dienelactone hydrolase family|Schizosaccharomyces ... 25 8.2
SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 25 8.2
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -3
Query: 232 SALSNS-HLRPNGRLRSSACIRGSTRVPVPSALNGASP 122
SALS+S HL+P SS+ + S P P A + +SP
Sbjct: 231 SALSSSSHLQPTSATSSSSRLYPSRPAPTPPASSSSSP 268
>SPAC31G5.04 |||homoisocitrate dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 362
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 141 ADGTGTRVLPRIHALLRSRPLGRRCEFDKADQSTVYNVVRRT 266
ADG G V+P L+ + P + +FD D + RT
Sbjct: 14 ADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERT 55
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +3
Query: 621 QHLERTTVSK*LNSFKFP---IVSRIKYVLAVVLH 716
Q L+R +VS+ ++S+ P ++ I+Y +AV+LH
Sbjct: 176 QALDRISVSEDVDSWDEPLRSVIENIRYTIAVILH 210
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 329 VQNFKTTCLSDSLKPQGVDTNCPAYNIIHCALISFIKFASP 207
V NF + DS+ P + CP Y I H S + SP
Sbjct: 272 VLNFDFKLVEDSILPLELSPGCPFYKIWHIRNTSCQSWPSP 312
>SPBC16E9.18 ||SPBC1E8.01|phosphatidylserine
decarboxylase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 437
Score = 26.6 bits (56), Expect = 3.6
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 275 DTNCPAYNIIHCALISFIKFASPSQW 198
+TNC Y +I+ A + +F SP+ W
Sbjct: 267 ETNCLYYAVIYLAPGDYHRFHSPTDW 292
>SPAC22F8.07c |rtf1||replication termination factor
Rtf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 387 LLVYNVVLSPAGFFEDTSRFVALGNRFVTFFRY 485
L V + +LSP G ++TS F+ LGN ++F Y
Sbjct: 19 LFVDDQLLSPIGDSKNTSSFIYLGNP-ISFHEY 50
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 446 KTRCIFKESGWAKNNVIDKKKVSDYFE 366
KT IFK++G+A NV+D S F+
Sbjct: 176 KTSPIFKKNGYATENVVDPISSSPRFK 202
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 136 NGASPHQYRMVRVTRASPCPARRD 65
N +SP + R++ V + PCP+ D
Sbjct: 134 NSSSPERDRLIIVPKEKPCPSFED 157
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = -2
Query: 434 IFKESGWAKNNVIDKKKVSDYFEQFAKDNP 345
IF+E G +N+ D DY + DNP
Sbjct: 13 IFEEKGSTSSNISDNCASRDYDVNISSDNP 42
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 371 FEQFAKDNPDWSAAVQNFKTTCLSDSLKPQGV 276
FEQF DNP++ +T+ ++ K GV
Sbjct: 439 FEQFLYDNPEYQKNTILIQTSTFTEEQKEYGV 470
>SPAC6G9.04 |mug79||meiotically upregulated gene
Mug79|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 627 LERTTVSK*LNSFKFPIVSRIKYVL 701
L ++T SK LNS+ P+ + +KY L
Sbjct: 842 LHKSTYSKKLNSYVVPMETFVKYAL 866
>SPAC977.15 |||dienelactone hydrolase family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 247
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = -2
Query: 509 NPKIIQPEVSEKCNKPISE-CDKTRCIFKESGWAKNNVIDKKKVSDYFEQFAKDNPDWSA 333
+P ++ P ++ + P+ C K + W K+ YFE F K + W A
Sbjct: 159 HPSLLDPVDAKHVHCPVCFLCSKDEDPEEVDAWKKSFENSPYFSESYFETFGKMHHGWMA 218
Query: 332 AVQN 321
A N
Sbjct: 219 ARAN 222
>SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 25.4 bits (53), Expect = 8.2
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +1
Query: 379 ETFFLSITLFLAQPDSLKIHLVLSHSEIGLLHFSDTSG*IILGLPRHEYIVFGNSPQ*TR 558
ET LSI L + ++KIHL + L T + + +EY+VF NS +
Sbjct: 255 ETITLSIADELKKMPNVKIHL---NKPAKTLVPHKTQSLVDVNGQAYEYVVFANSSRNLE 311
Query: 559 GCSGMLPLNTPTT 597
+ TPT+
Sbjct: 312 NLISCPKMETPTS 324
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,044,300
Number of Sequences: 5004
Number of extensions: 66179
Number of successful extensions: 183
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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