Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_H24
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 30 0.95
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 30 0.95
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 30 0.95
U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical pr... 28 3.8
AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical ... 28 3.8
AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical ... 28 5.0
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical pr... 27 8.8
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 8.8
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 8.8
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 27 8.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 159 bits (386), Expect = 1e-39
Identities = 71/126 (56%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Frame = -2
Query: 546 TXIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF 367
T I GRF+PG TNQIQ F+EPRLL++ DP DHQ +TEASYV +PVI+ NT+SPL+
Sbjct: 97 TAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKL 156
Query: 366 VDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRW-----DVVVDLFFYRDPEESE 202
+DI +PCN K SIGLMWW+LARE+L LRG + R + +++ DL+FYRDP E+E
Sbjct: 157 IDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLEGKEIMPDLYFYRDPTETE 216
Query: 201 KDEQQA 184
K+E A
Sbjct: 217 KEETGA 222
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 527 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 375
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 527 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 375
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 527 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 375
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 30.3 bits (65), Expect = 0.95
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -3
Query: 527 SHQVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 375
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>U39742-3|AAY86225.1| 188|Caenorhabditis elegans Hypothetical
protein C25F6.8 protein.
Length = 188
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 393 CNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVL 286
CNTD+ R + CNT + +G+ + L+AR ++
Sbjct: 49 CNTDAEFRLIQCCSSCNT---NGVGIAYDLVARSLV 81
>AL032621-5|CAA21492.2| 404|Caenorhabditis elegans Hypothetical
protein Y45F3A.8 protein.
Length = 404
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 421 ICQHSCDCFVQHRLPTKICGHCYPM---QHQVFPLYWFD 314
+C+HS + K CGHC PM +HQ P + D
Sbjct: 342 LCEHSRYKTLMENYCPKACGHCIPMCRDRHQNCPQFHED 380
>AL033510-7|CAA22069.1| 124|Caenorhabditis elegans Hypothetical
protein Y40H7A.11 protein.
Length = 124
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 342 TKSSHSIGLMWWLLA 298
T+ H IG+MWWL A
Sbjct: 72 TRVEHKIGIMWWLCA 86
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3145 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3157 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3043 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3044 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3126 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3145 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3157 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3043 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3044 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3126 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z68131-1|CAA92217.1| 467|Caenorhabditis elegans Hypothetical
protein B0395.2 protein.
Length = 467
Score = 27.1 bits (57), Expect = 8.8
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +1
Query: 106 WLQCFIPVFMDRSNYFWFSWYHS 174
WL CF + F+ +W+HS
Sbjct: 302 WLNCFSEMMQFADRQFYLNWWHS 324
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3157 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3157 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 534 GRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 427
G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3157 GKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,991,825
Number of Sequences: 27780
Number of extensions: 254552
Number of successful extensions: 799
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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