Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_H21
(511 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024765-4|AAF60525.1| 83|Caenorhabditis elegans Human ddp rel... 63 1e-10
AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc fi... 61 4e-10
Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc fi... 41 5e-04
U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to i... 33 0.091
U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to i... 33 0.091
AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc fi... 33 0.091
AF101312-2|AAC69222.2| 475|Caenorhabditis elegans Hypothetical ... 33 0.12
AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical ... 28 3.4
U28944-9|AAL02438.1| 122|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF106579-7|AAC78199.2| 391|Caenorhabditis elegans Hypothetical ... 28 4.5
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 28 4.5
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 28 4.5
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 28 4.5
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 28 4.5
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 28 4.5
>AC024765-4|AAF60525.1| 83|Caenorhabditis elegans Human ddp
related protein 1 protein.
Length = 83
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Frame = -1
Query: 475 ADSELQDFLIQ---EKQKAQFQAQIHEFNSFCWDKCIE--KPGAKLDSRTETCITNCVER 311
AD +L FL Q E Q+ +F Q+H CWD C +P +K+D +T+TCI NCV R
Sbjct: 4 ADPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCIQNCVNR 63
Query: 310 FIDTSLLITNRFAQM 266
ID S + ++M
Sbjct: 64 MIDASNFMVEHLSKM 78
>AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 83
Score = 61.3 bits (142), Expect = 4e-10
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = -1
Query: 475 ADSELQDFLIQ---EKQKAQFQAQIHEFNSFCWDKCIE--KPGAKLDSRTETCITNCVER 311
AD +L FL Q E Q+ +F Q+H CWD C +P +K+D +T+TC NCV R
Sbjct: 4 ADPQLNRFLQQLQAETQRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCFQNCVNR 63
Query: 310 FIDTSLLITNRFAQM 266
ID S + ++M
Sbjct: 64 MIDASNFMVEHLSKM 78
>Z96047-1|CAB09410.1| 108|Caenorhabditis elegans Hypothetical
protein DY3.1 protein.
Length = 108
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = -1
Query: 445 QEKQKAQFQAQIHEFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 266
Q+ A Q + + + C +KCI PG+ L S + C+ C++RF+++ L++ +
Sbjct: 27 QQAALANAQNLVTDISEKCTNKCITAPGSSLASGEKQCLQRCMDRFMESWNLVSQTLQKR 86
Query: 265 LEK 257
L++
Sbjct: 87 LQE 89
>AF144704-1|AAD39955.1| 108|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 108
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/63 (26%), Positives = 35/63 (55%)
Frame = -1
Query: 445 QEKQKAQFQAQIHEFNSFCWDKCIEKPGAKLDSRTETCITNCVERFIDTSLLITNRFAQM 266
Q+ A Q + + + C +KCI PG+ L S + C+ C++RF+++ L++ +
Sbjct: 27 QQAALANAQNLVTDISEKCTNKCITAPGSSLASGEKQCLQRCMDRFMESWNLVSQTLQKR 86
Query: 265 LEK 257
L++
Sbjct: 87 LQE 89
>U61947-12|AAO44913.1| 78|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform b protein.
Length = 78
Score = 33.5 bits (73), Expect = 0.091
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 391 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQ 269
C++ C+ + G++ + + E+C NC+++F+ + ++ RF +
Sbjct: 24 CFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRFQE 65
>U61947-11|AAB03140.1| 90|Caenorhabditis elegans Transport to
inner mitochondrialmembrane (yeast tim) protein 9.1,
isoform a protein.
Length = 90
Score = 33.5 bits (73), Expect = 0.091
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 391 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQ 269
C++ C+ + G++ + + E+C NC+++F+ + ++ RF +
Sbjct: 24 CFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRFQE 65
>AF150108-1|AAD40014.1| 90|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 90
Score = 33.5 bits (73), Expect = 0.091
Identities = 10/42 (23%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 391 CWDKCIEKPGAK-LDSRTETCITNCVERFIDTSLLITNRFAQ 269
C++ C+ + G++ + + E+C NC+++F+ + ++ RF +
Sbjct: 24 CFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRFQE 65
>AF101312-2|AAC69222.2| 475|Caenorhabditis elegans Hypothetical
protein F56E10.3 protein.
Length = 475
Score = 33.1 bits (72), Expect = 0.12
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +2
Query: 47 QTTITCSNSDFLSLNMQNNYYYTTTVKQSIVNSNLLIYFYTNINLKFSLYYFMN*N*KFQ 226
Q I C S ++S Q N Y TTT SI +L ++ +T FS+ YF+ + KF
Sbjct: 165 QKFIFCFLSVYISRIFQENLYSTTTTYTSISLFSLSLFPFT---FPFSIPYFLF-SYKFP 220
Query: 227 IFYTSMHSAP 256
F ++H+ P
Sbjct: 221 SFCRNIHTIP 230
>AF067944-4|AAC17670.2| 279|Caenorhabditis elegans Hypothetical
protein K10C9.3 protein.
Length = 279
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -2
Query: 468 PNFRIS*YKKNKRHSSKHRYTNLIVSVGTSVLKNLELSW-TLGPKHVSQTVWKDSLILH 295
PNF Y +N R + +H NLI S+ L + W L PK Q+ WK H
Sbjct: 64 PNFENGSYPQNCRGTPRHFDENLI----KSIEDRLVVVWPNLYPKKTIQSFWKHEYDKH 118
>U28944-9|AAL02438.1| 122|Caenorhabditis elegans Hypothetical
protein C18A3.9 protein.
Length = 122
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 38 CALQTTITCSNSDFLSLNMQNNYYYTTTVKQSIVNSNLLIYFYTNI 175
C+++ I N+ F+ + YY V ++ N+NLLI++Y++I
Sbjct: 74 CSIRCAIIIVNNFFVFM------YYIFLVLVNVCNNNLLIFYYSSI 113
>AF106579-7|AAC78199.2| 391|Caenorhabditis elegans Hypothetical
protein F54E2.1 protein.
Length = 391
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 47 QTTITCSNSDFLSLNMQNNYYYTTTVKQSIVNSNLLIYFYTNIN 178
QT IT + S+ +L + N + Y TT KQS + + +Y NIN
Sbjct: 93 QTLITTNLSNG-TLALMNGFIYVTTSKQS-TDQSFRVYSVDNIN 134
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 50 TTITCSNSDFLSLNMQNNYYYTTTVKQSIVNS---NLLIYFYTNI 175
+T C+ SD+ SL QN+YY + S+ +S +L+++ NI
Sbjct: 493 STARCAPSDYCSLPQQNDYYPRSMSGSSVSSSRQEDLMMHSNNNI 537
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 50 TTITCSNSDFLSLNMQNNYYYTTTVKQSIVNS---NLLIYFYTNI 175
+T C+ SD+ SL QN+YY + S+ +S +L+++ NI
Sbjct: 491 STARCAPSDYCSLPQQNDYYPPSMSGSSVSSSRQEDLMMHSNNNI 535
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 50 TTITCSNSDFLSLNMQNNYYYTTTVKQSIVNS---NLLIYFYTNI 175
+T C+ SD+ SL QN+YY + S+ +S +L+++ NI
Sbjct: 491 STARCAPSDYCSLPQQNDYYPPSMSGSSVSSSRQEDLMMHSNNNI 535
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 50 TTITCSNSDFLSLNMQNNYYYTTTVKQSIVNS---NLLIYFYTNI 175
+T C+ SD+ SL QN+YY + S+ +S +L+++ NI
Sbjct: 491 STARCAPSDYCSLPQQNDYYPPSMSGSSVSSSRQEDLMMHSNNNI 535
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 50 TTITCSNSDFLSLNMQNNYYYTTTVKQSIVNS---NLLIYFYTNI 175
+T C+ SD+ SL QN+YY + S+ +S +L+++ NI
Sbjct: 491 STARCAPSDYCSLPQQNDYYPPSMSGSSVSSSRQEDLMMHSNNNI 535
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,907,207
Number of Sequences: 27780
Number of extensions: 213989
Number of successful extensions: 519
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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