Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_H18
         (604 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         26   0.82 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.3  
U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease prot...    24   4.4  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   7.6  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   7.6  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   7.6  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = +2

Query: 314 AGISTGESDSCSV*CPSGIGEGDDTPKTPREPDPKLEPESSMV*APDPKTFCGESS 481
           A +S GE  + SV  P+        P     P P+L   S     P P T  GES+
Sbjct: 264 ASVSNGEQPASSVGDPAN----PQQPSVIFSPVPRLAGSSPAAAPPSPPTSAGESN 315


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 293 VPKLPTEAGISTGESDSCSV*CPSGIGEGDDTPKTP 400
           +P+L T + +S  E  SC + CP+ I    + P TP
Sbjct: 88  LPELVTRS-LSNLELPSCRLPCPNLIPRPAEVPTTP 122


>U21917-1|AAA73920.1|  271|Anopheles gambiae serine protease
           protein.
          Length = 271

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 191 QASLPCPAYLKAARLSVAAVQLAPRPLVSCW 99
           Q SLP  AY++   L  ++V      ++S W
Sbjct: 143 QLSLPSSAYIRPIALRTSSVPAGSEVVISGW 173


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 271 LINSNCLSSEAAHRSRDFYWGIR 339
           L++     + +   SRDFYW ++
Sbjct: 544 LVDFTAGKNTSVRNSRDFYWSVK 566


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 271 LINSNCLSSEAAHRSRDFYWGIR 339
           L++     + +   SRDFYW ++
Sbjct: 544 LVDFTAGKNTSVRNSRDFYWSVK 566


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 7.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 271 LINSNCLSSEAAHRSRDFYWGIR 339
           L++     + +   SRDFYW ++
Sbjct: 544 LVDFTAGKNTSVRNSRDFYWSVK 566


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,128
Number of Sequences: 2352
Number of extensions: 9196
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)