Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_H16
(310 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 52 7e-08
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 52 7e-08
01_06_0031 + 25760878-25761342 45 1e-05
10_08_0796 + 20643667-20643912 42 1e-04
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 42 1e-04
09_04_0554 + 18495073-18495175,18495794-18496032 40 5e-04
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 40 5e-04
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 39 7e-04
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 39 7e-04
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 39 7e-04
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 39 7e-04
06_03_1149 + 28018932-28020529,28020989-28021067 39 7e-04
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 39 7e-04
05_01_0438 + 3475017-3475484 39 7e-04
04_04_1238 + 31997671-31998816 39 7e-04
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 39 7e-04
02_01_0464 - 3340642-3342015,3342403-3342405 39 7e-04
01_03_0108 - 12628711-12629178 39 7e-04
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 39 0.001
01_06_0033 + 25765300-25765758 38 0.002
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 32 0.11
10_08_0470 - 18151326-18151769 30 0.32
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915... 29 0.56
01_06_0310 - 28376378-28376607,28376789-28376897 28 1.7
08_01_0566 - 5028512-5029150 27 2.3
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 27 4.0
09_04_0377 + 17086775-17088310 26 5.2
02_03_0199 + 16263549-16263644,16264941-16265899,16267140-162677... 25 9.2
02_01_0593 + 4408229-4408294,4408764-4409096,4409756-4409794,440... 25 9.2
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 52.4 bits (120), Expect = 7e-08
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 132 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQR 10
+IKVKTLTGKEIEIDIEPTD EGIPP QQR
Sbjct: 78 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 52.4 bits (120), Expect = 7e-08
Identities = 27/41 (65%), Positives = 28/41 (68%)
Frame = -2
Query: 132 LIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQR 10
+IKVKTLTGKEIEIDIEPTD EGIPP QQR
Sbjct: 106 MIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 146
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTD 73
M I VKTLTGK I +++E +D
Sbjct: 1 MQIFVKTLTGKTITLEVESSD 21
>01_06_0031 + 25760878-25761342
Length = 154
Score = 45.2 bits (102), Expect = 1e-05
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = -2
Query: 129 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQR 10
+KV+TLTGKEI+IDIE TD EGIPP QQR
Sbjct: 79 VKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQR 118
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIF 45
>10_08_0796 + 20643667-20643912
Length = 81
Score = 41.5 bits (93), Expect = 1e-04
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2
Query: 129 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQ 13
+KVKTLTGKE+E+ IE T+ EGIPP QQ
Sbjct: 6 VKVKTLTGKEVEVSIEATETVARIKEQVEAAEGIPPPQQ 44
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = -2
Query: 138 KMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
KM I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 113 KMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 158
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = -2
Query: 138 KMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
+M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 40 QMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 85
Score = 37.5 bits (83), Expect = 0.002
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I + +E +D EGIPP QQR F
Sbjct: 117 MQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIF 161
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 349
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 425
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 501
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 468 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 512
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -2
Query: 138 KMLIKVKTLTGKEIEID-IEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
+M I VKTLTG I + + EGIPP QQR F
Sbjct: 390 QMQIFVKTLTGNTIRLSPLTRLTMSRPRFRTRRDKEGIPPDQQRLIF 436
>05_01_0438 + 3475017-3475484
Length = 155
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>04_04_1238 + 31997671-31998816
Length = 381
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 121
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 197
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 273
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 349
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 2 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 46
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 122
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 154 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 198
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 230 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 274
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 350
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 382 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 426
>01_03_0108 - 12628711-12629178
Length = 155
Score = 39.1 bits (87), Expect = 7e-04
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIF 45
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 38.7 bits (86), Expect = 0.001
Identities = 21/45 (46%), Positives = 25/45 (55%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTLTGK I +++E +D EGIPP QQR F
Sbjct: 1 MQIFVKTLTGKTITLEVENSDAVANVKAKIQDKEGIPPDQQRLIF 45
>01_06_0033 + 25765300-25765758
Length = 152
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -2
Query: 129 IKVKTLTGKEIEIDIEPTD 73
IKVK LTGKEI++DIEPTD
Sbjct: 80 IKVKMLTGKEIDVDIEPTD 98
Score = 31.5 bits (68), Expect = 0.14
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I VKTL G+ I + ++ D EG+PP QQR F
Sbjct: 1 MQIFVKTLNGRTITLVVDSCDSVENVKARIHDREGVPPHQQRLIF 45
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 31.9 bits (69), Expect = 0.11
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 204 NFILSRSNL-SPCYITINNYNSFKMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGI 28
N +L+R L S C I N KM I VKTLTG I +++ P+D GI
Sbjct: 71 NQLLARIRLLSTCMFVICNN---KMQIIVKTLTGITITLEVRPSDTIDDVKAKIQDKVGI 127
Query: 27 PPQQQ 13
QQ
Sbjct: 128 RSDQQ 132
>10_08_0470 - 18151326-18151769
Length = 147
Score = 30.3 bits (65), Expect = 0.32
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -2
Query: 129 IKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
I VK LTGK + +EP+D EG+PP QQ F
Sbjct: 8 IFVKGLTGKTTALRMEPSDTVESVKVKLVDKEGLPPDQQPLIF 50
>08_02_0751 +
20789843-20789908,20791152-20791313,20791516-20791566,
20792096-20792160,20792385-20792459,20792603-20792780,
20793171-20793353,20793436-20793549,20793627-20793736,
20793826-20793904,20794035-20794172
Length = 406
Score = 29.5 bits (63), Expect = 0.56
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPT 76
M + +KTL G EID+EPT
Sbjct: 1 MKVSIKTLKGSSFEIDVEPT 20
>01_06_0310 - 28376378-28376607,28376789-28376897
Length = 112
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 94 NRYRTHRQSGKNQRKSRRKGRHSAAATAA 8
+R R H + K +SRR+ R SAA AA
Sbjct: 74 DRRRQHNAAAKQTTRSRRRRRSSAATVAA 102
>08_01_0566 - 5028512-5029150
Length = 212
Score = 27.5 bits (58), Expect = 2.3
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
M I V+T+T + +++ P D GIP QQR F
Sbjct: 1 MQIFVRTVTAGPLAVEVNPWDTVGKVKAKIQAKGGIPAAQQRLMF 45
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 26.6 bits (56), Expect = 4.0
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -2
Query: 138 KMLIKVKTLTGKEIEIDIEPTDXXXXXXXXXXXXEGIPPQQQRRXF 1
+M I V L G + +EP+D +G+PP QQR F
Sbjct: 69 EMQILVSGLRGNTWTLWVEPSDTVESVKLQLQEKDGLPPCQQRLIF 114
>09_04_0377 + 17086775-17088310
Length = 511
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 124 SQDAYW*RN*NRYRTHRQSGKNQRKSRRKGRHS 26
S+D+ R R R H++S + R SRRK R S
Sbjct: 256 SEDSMDRRKKKRSRRHKKSKRRGRSSRRKKRKS 288
>02_03_0199 +
16263549-16263644,16264941-16265899,16267140-16267791,
16267895-16267981,16268253-16268381,16269990-16270036,
16271337-16271438,16272720-16272843,16272981-16273028,
16273934-16274026,16274325-16274408,16274536-16274619,
16274751-16274819,16275531-16275590,16275946-16276017,
16276957-16277064,16278162-16278238,16278391-16278474,
16278617-16278728,16278778-16278810,16278811-16278900,
16279012-16279077,16279163-16279258,16279446-16279497,
16279723-16279775,16279998-16280018
Length = 1165
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 207 YNFILSRSNLSPCYITINNYNSFKMLIKVKTLTG 106
+NF+ + S C++T+ N N LI+ K+L G
Sbjct: 92 HNFVTNNIGNSRCFLTVCNKN-LSFLIRNKSLFG 124
>02_01_0593 +
4408229-4408294,4408764-4409096,4409756-4409794,
4409870-4409937,4410024-4410068,4410478-4410655,
4410740-4410871,4410941-4411009,4411258-4411305,
4411498-4411545,4411654-4411763,4412044-4412125,
4412232-4412345
Length = 443
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2
Query: 135 MLIKVKTLTGKEIEIDIEPTD 73
M + VKTL G + EI ++P D
Sbjct: 1 MKLTVKTLKGTQFEIRVQPND 21
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,278,862
Number of Sequences: 37544
Number of extensions: 84469
Number of successful extensions: 196
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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