Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_H15
(611 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 3.2
BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. 30 7.4
AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 7.4
AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 7.4
AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 7.4
AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 7.4
AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligas... 30 7.4
AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting ... 30 7.4
AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligas... 30 7.4
AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens ... 25 8.2
BC110367-1|AAI10368.1| 1047|Homo sapiens chromosome 15 open read... 29 9.8
BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom... 29 9.8
BC011379-1|AAH11379.2| 1047|Homo sapiens chromosome 15 open read... 29 9.8
AK128205-1|BAC87324.1| 1047|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK125604-1|BAC86215.1| 1047|Homo sapiens protein ( Homo sapiens ... 29 9.8
AF495726-1|AAQ06680.1| 892|Homo sapiens unknown protein. 29 9.8
AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom... 29 9.8
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRST 393
P P+E TSPA +P + S K +SP++RST
Sbjct: 3183 PAPAEETGTSPAGTSPGSPEVSTTLKIMSSKEPSISPEIRST 3224
>BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein.
Length = 903
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 254 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 297
>AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 254 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 297
>AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 213 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 256
>AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 254 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 297
>AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 213 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 256
>AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligase
ITCH protein.
Length = 862
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 213 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 256
>AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting
protein 4 protein.
Length = 739
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 90 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 133
>AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligase
Itch protein.
Length = 862
Score = 29.9 bits (64), Expect = 7.4
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 518 PRPSEPKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 387
PRPS P P +P R A + A +E+ L P +T T
Sbjct: 213 PRPSRPPPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTNT 256
>AK095631-1|BAC04594.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ38312 fis, clone FCBBF3021506. ).
Length = 134
Score = 25.4 bits (53), Expect(2) = 8.2
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +3
Query: 36 IFACVCVCVCL 68
+F C+C+CVC+
Sbjct: 84 VFVCMCLCVCI 94
Score = 23.0 bits (47), Expect(2) = 8.2
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = +3
Query: 12 HVVXSVFLIFACVCVCV 62
H+ VF ++ C+CVC+
Sbjct: 53 HMCSCVF-VYVCICVCL 68
>BC110367-1|AAI10368.1| 1047|Homo sapiens chromosome 15 open reading
frame 39 protein.
Length = 1047
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 ALPRPSEPKPTSPARGAPCRSTNEALAETW--SQKNQKLSPQVRSTATLPV 378
A R +P P S P R EA +TW S + +KL P++ + P+
Sbjct: 412 AFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPI 462
>BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain
family, member 6 protein.
Length = 1037
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1
Query: 509 SEPKPTSPARGAPCRSTNEALAETW---SQKNQKLSPQVRSTATLP 381
S+P T P+ PC+ST ++ W S+ +Q PQ +S++T P
Sbjct: 977 SQPSQTKPS---PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019
>BC011379-1|AAH11379.2| 1047|Homo sapiens chromosome 15 open reading
frame 39 protein.
Length = 1047
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 ALPRPSEPKPTSPARGAPCRSTNEALAETW--SQKNQKLSPQVRSTATLPV 378
A R +P P S P R EA +TW S + +KL P++ + P+
Sbjct: 412 AFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPI 462
>AK128205-1|BAC87324.1| 1047|Homo sapiens protein ( Homo sapiens
cDNA FLJ46337 fis, clone TESTI4046245. ).
Length = 1047
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 ALPRPSEPKPTSPARGAPCRSTNEALAETW--SQKNQKLSPQVRSTATLPV 378
A R +P P S P R EA +TW S + +KL P++ + P+
Sbjct: 412 AFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPI 462
>AK125604-1|BAC86215.1| 1047|Homo sapiens protein ( Homo sapiens
cDNA FLJ43616 fis, clone SPLEN2016554. ).
Length = 1047
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 ALPRPSEPKPTSPARGAPCRSTNEALAETW--SQKNQKLSPQVRSTATLPV 378
A R +P P S P R EA +TW S + +KL P++ + P+
Sbjct: 412 AFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPI 462
>AF495726-1|AAQ06680.1| 892|Homo sapiens unknown protein.
Length = 892
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -1
Query: 524 ALPRPSEPKPTSPARGAPCRSTNEALAETW--SQKNQKLSPQVRSTATLPV 378
A R +P P S P R EA +TW S + +KL P++ + P+
Sbjct: 257 AFQRACQPLPASQPCSEPVRPAQEAEEKTWLPSCRKEKLQPRLSEHSGPPI 307
>AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain
protein 6 protein.
Length = 1037
Score = 29.5 bits (63), Expect = 9.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -1
Query: 509 SEPKPTSPARGAPCRSTNEALAETW---SQKNQKLSPQVRSTATLP 381
S+P T P+ PC+ST ++ W S+ +Q PQ +S++T P
Sbjct: 977 SQPSQTKPS---PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,345,780
Number of Sequences: 237096
Number of extensions: 1269674
Number of successful extensions: 4263
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4217
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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