Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_H14
         (747 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83111-3|CAB05536.1|  361|Caenorhabditis elegans Hypothetical pr...    31   0.87 
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    29   4.6  

>Z83111-3|CAB05536.1|  361|Caenorhabditis elegans Hypothetical
           protein F57G8.4 protein.
          Length = 361

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 496 KCNFKQLSISLYFCVYHYFGYETTHN 419
           K NF  L +S +F +++YF YE  +N
Sbjct: 143 KINFIVLGVSTFFSIFYYFRYEVVNN 168


>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -1

Query: 555  IYFIITKLTNAFRYDL*INKNVILNNYRYL 466
            ++ +I +L + ++YDL ++KN++   Y YL
Sbjct: 3200 VFHLIERLLDYYQYDLILSKNLVAIKYLYL 3229


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -1

Query: 555  IYFIITKLTNAFRYDL*INKNVILNNYRYL 466
            ++ +I +L + ++YDL ++KN++   Y YL
Sbjct: 3202 VFHLIERLLDYYQYDLILSKNLVAIKYLYL 3231


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,234,755
Number of Sequences: 27780
Number of extensions: 292073
Number of successful extensions: 543
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)