Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_H11
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 85 1e-17
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 74 2e-14
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 72 6e-14
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 42 1e-04
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 35 0.011
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 31 0.18
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 31 0.18
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 29 0.55
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 27 1.7
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 27 2.2
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 3.9
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 9.0
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 84.6 bits (200), Expect = 1e-17
Identities = 44/114 (38%), Positives = 69/114 (60%)
Frame = -3
Query: 622 IGDALRALGXNPTESDVXKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGLRH 443
IGD LRA G NPT +++ + L P E + E FL + + +F++G +
Sbjct: 28 IGDLLRACGQNPTLAEITEIESTL-PAE-VDMEQFLQVLNRPNGFDMPGDPEEFVKGFQV 85
Query: 442 FDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHLIM 281
FDKD G I ELR++L++LGEKLS++E+++LL+G G +NY +FV +I+
Sbjct: 86 FDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMVNYHDFVQMIL 139
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 73.7 bits (173), Expect = 2e-14
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Frame = -3
Query: 625 QIGDALRALGXNPTESDVXKCTLHLKPDER--ISFEVFLPIYQAISKARSGDTANDFIEG 452
++G +R+LG +PT +++ + D I F FL + K + D + E
Sbjct: 33 ELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMAR--KMKDTDNEEEVREA 90
Query: 451 LRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLL-QGQEDSQGNINYENFVHLI 284
+ FDKDGNG+I+ EL H+L++LGE+LS +EV ++ + D G INYE F +I
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVI 147
Score = 33.9 bits (74), Expect = 0.019
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = -3
Query: 466 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLL-QGQEDSQGNINYENFVH 290
+F E FD+D +G I+S EL ++ +LG+ + E++ ++ + D G I++ F+
Sbjct: 13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLT 72
Query: 289 LI 284
++
Sbjct: 73 MM 74
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 72.1 bits (169), Expect = 6e-14
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = -3
Query: 628 AQIGDALRALGXNPTESDVXKCTLHLKPDERISFEVFLPIYQAISKARSGDTANDFIEGL 449
+ +G LR+LG N T++++ K + L + I + F+ +K R ++ ++I+
Sbjct: 29 SHVGSVLRSLGINVTDAELAKLSNEL--GDAIDEKKFMSFVS--NKLRETESEEEYIKAF 84
Query: 448 RHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQ-GQEDSQGNINYENFVHLIM 281
R FDKD +G+I +A+ + TLGEKLSD+EV+ ++Q + G+ +Y +FV IM
Sbjct: 85 RVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFDYYDFVQRIM 141
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = -3
Query: 469 NDFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVH 290
ND +E FD +G I + +R LS++G+++ EVE +L+ S G YE FV
Sbjct: 117 NDLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSY-TSHGVFYYEKFVD 175
Query: 289 LI 284
I
Sbjct: 176 AI 177
Score = 29.9 bits (64), Expect = 0.32
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -3
Query: 457 EGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQ 338
E DKDG+G I +++ +L++L + S+D + + +
Sbjct: 52 EAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFE 91
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 34.7 bits (76), Expect = 0.011
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -3
Query: 448 RHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHLIMQ 278
RHF+K + ++ E L++LG +E L +S+ + YE F ++M+
Sbjct: 494 RHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEGVTYERFTEIVME 550
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 30.7 bits (66), Expect = 0.18
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = -3
Query: 466 DFIEGLRHFDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQG-QEDSQGNINYENFVH 290
D E + FD D + I ELR + LG EV ++L+ + +G + E+FV
Sbjct: 38 DINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVR 97
Query: 289 LIMQ 278
++ +
Sbjct: 98 VMTE 101
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -3
Query: 469 NDFIEGLRHFDKDGNGFISSAE-LRHLLSTLGEKLSDDEVEQLLQ-GQEDSQGNINYEN 299
++ ++ LR FDK G G++ + +R + + E+ +E+++ + +D G I+ N
Sbjct: 73 SEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRN 131
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 30.7 bits (66), Expect = 0.18
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 442 FDKDGNGFISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHL 287
FD G+I +LR + LGE L+ +++ QL+ + G ++ E F L
Sbjct: 21 FDVTHKGYIDFEDLRRSCAQLGENLTKEQL-QLMLDLAGTNGKVSREEFAEL 71
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 29.1 bits (62), Expect = 0.55
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +2
Query: 350 LYLIITKLLSESREQVSQFRRRDEPIAIFVKMAQTLNKVISSVATACFRYGLVNWQK 520
L+L+ L++ +Q + R + IAIF K + +K I SVA R+ L QK
Sbjct: 1377 LHLLFASLVAHKFDQPQHAQTRTKIIAIFFKDLYSPHKEIYSVAIDALRHVLSQNQK 1433
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 27.5 bits (58), Expect = 1.7
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = -3
Query: 526 EVFLPIYQAISKARSGDTANDFI--EGLRHFDKDGNGFISS-AELRHLLSTLGEK-LSDD 359
++F+ + I+K +G + I + RH DK GN F ++ EL +L +G+K L++
Sbjct: 643 DIFMSVTD-ITKIENGTKIYEEILQDCCRHIDKSGNEFTTAYLELLEVLLKVGQKYLAES 701
Query: 358 EVEQLL 341
+E +L
Sbjct: 702 LLEHIL 707
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 27.1 bits (57), Expect = 2.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -3
Query: 418 ISSAELRHLLSTLGEKLSDDEVEQLLQGQEDSQGNINYENFVHLIMQG 275
I A++ LLSTL E D ++EQ+ Q + + Y +F+ ++QG
Sbjct: 42 IVKAQILFLLSTLREDQYDTKLEQIRQLINKNAPRV-YHHFLRRLIQG 88
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 3.9
Identities = 16/67 (23%), Positives = 32/67 (47%)
Frame = +2
Query: 182 LTVSHYGSNCMVTDLVSLQIKVLQQMMT*NSALHDEVNKVLIVDISLRVFLSLQELLYLI 361
L S+Y ++ D V Q+K L Q +S + + + + RV S+ + L+L+
Sbjct: 539 LETSYYNCMTVLEDEVIAQLKSLLQYSKTSSQMFTTLMRFQPLFFRTRVRTSISDCLHLL 598
Query: 362 ITKLLSE 382
+ ++ E
Sbjct: 599 VNRIKQE 605
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 425 WVHLFCGTATPALY 384
WVHL C + TP +Y
Sbjct: 927 WVHLICASWTPDVY 940
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,230,752
Number of Sequences: 5004
Number of extensions: 39995
Number of successful extensions: 129
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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