Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_H10
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY654628-1|AAT66025.1|  434|Homo sapiens IFGP6 isoform 2 protein.      32   1.5  
BC101684-1|AAI01685.1|  333|Homo sapiens COX18 cytochrome c oxid...    31   2.7  
AY957565-1|AAY35061.1|  333|Homo sapiens mitochondrial COX18 pro...    31   2.7  
AY957564-1|AAY35060.1|  333|Homo sapiens mitochondrial COX18 pro...    31   2.7  
AM055750-1|CAJ20055.1|  253|Homo sapiens Cox18Hs1 protein protein.     31   2.7  
AK096310-1|BAC04758.1|  333|Homo sapiens protein ( Homo sapiens ...    31   2.7  
AY654627-1|AAT66024.1|  311|Homo sapiens IFGP6 isoform 3 protein.      31   3.6  
AY513661-1|AAS82876.1|  434|Homo sapiens Fc receptor-like protei...    31   3.6  
AY212514-1|AAP47270.1|  397|Homo sapiens IFGP6 protein.                31   3.6  
AL590560-5|CAM14072.1|  434|Homo sapiens Fc receptor-like 6 prot...    31   3.6  
AL590560-4|CAM14071.1|  311|Homo sapiens Fc receptor-like 6 prot...    31   3.6  
AL590560-3|CAM14070.1|  397|Homo sapiens Fc receptor-like 6 prot...    31   3.6  
AL590560-2|CAH71102.2|  413|Homo sapiens Fc receptor-like 6 prot...    31   3.6  
AK131201-1|BAD18394.1|  413|Homo sapiens protein ( Homo sapiens ...    31   3.6  

>AY654628-1|AAT66025.1|  434|Homo sapiens IFGP6 isoform 2 protein.
          Length = 434

 Score = 31.9 bits (69), Expect = 1.5
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  SHSA C    + +F
Sbjct: 230 AQRGSPPILY--SFYLDEKIVGSHSAPCGGTTSLLF 263


>BC101684-1|AAI01685.1|  333|Homo sapiens COX18 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 333

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 368 WDRYVLSTFAARGAVPIPY-KFNFYVIEKVKN 460
           W   +LST A RGAV +P   +  Y++ KV+N
Sbjct: 83  WGSILLSTVALRGAVTLPLAAYQHYILAKVEN 114


>AY957565-1|AAY35061.1|  333|Homo sapiens mitochondrial COX18
           protein.
          Length = 333

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 368 WDRYVLSTFAARGAVPIPY-KFNFYVIEKVKN 460
           W   +LST A RGAV +P   +  Y++ KV+N
Sbjct: 83  WGSILLSTVALRGAVTLPLAAYQHYILAKVEN 114


>AY957564-1|AAY35060.1|  333|Homo sapiens mitochondrial COX18
           protein.
          Length = 333

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 368 WDRYVLSTFAARGAVPIPY-KFNFYVIEKVKN 460
           W   +LST A RGAV +P   +  Y++ KV+N
Sbjct: 83  WGSILLSTVALRGAVTLPLAAYQHYILAKVEN 114


>AM055750-1|CAJ20055.1|  253|Homo sapiens Cox18Hs1 protein protein.
          Length = 253

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 368 WDRYVLSTFAARGAVPIPY-KFNFYVIEKVKN 460
           W   +LST A RGAV +P   +  Y++ KV+N
Sbjct: 3   WGSILLSTVALRGAVTLPLAAYQHYILAKVEN 34


>AK096310-1|BAC04758.1|  333|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38991 fis, clone NT2RI2008622. ).
          Length = 333

 Score = 31.1 bits (67), Expect = 2.7
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 368 WDRYVLSTFAARGAVPIPY-KFNFYVIEKVKN 460
           W   +LST A RGAV +P   +  Y++ KV+N
Sbjct: 83  WGSILLSTVALRGAVTLPLAAYQHYILAKVEN 114


>AY654627-1|AAT66024.1|  311|Homo sapiens IFGP6 isoform 3 protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 135 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 168


>AY513661-1|AAS82876.1|  434|Homo sapiens Fc receptor-like protein 6
           protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 230 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 263


>AY212514-1|AAP47270.1|  397|Homo sapiens IFGP6 protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 230 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 263


>AL590560-5|CAM14072.1|  434|Homo sapiens Fc receptor-like 6
           protein.
          Length = 434

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 230 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 263


>AL590560-4|CAM14071.1|  311|Homo sapiens Fc receptor-like 6
           protein.
          Length = 311

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 135 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 168


>AL590560-3|CAM14070.1|  397|Homo sapiens Fc receptor-like 6
           protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 230 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 263


>AL590560-2|CAH71102.2|  413|Homo sapiens Fc receptor-like 6
           protein.
          Length = 413

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 237 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 270


>AK131201-1|BAD18394.1|  413|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16056 fis, clone SPLEN2010588, weakly  similar
           to CELL SURFACE GLYCOPROTEIN GP42 PRECURSOR. ).
          Length = 413

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = +2

Query: 395 AARGAVPIPYKFNFYVIEKVKNSHSAHCSTPQTCMF 502
           A RG+ PI Y  +FY+ EK+  +HSA C    + +F
Sbjct: 237 AQRGSPPILY--SFYLDEKIVGNHSAPCGGTTSLLF 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,827,979
Number of Sequences: 237096
Number of extensions: 1302784
Number of successful extensions: 1976
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1976
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)