Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_H08
(698 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 119 9e-27
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 119 9e-27
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 119 9e-27
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 119 9e-27
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 119 9e-27
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 119 9e-27
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 118 2e-26
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 118 2e-26
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 118 2e-26
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 118 2e-26
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 118 2e-26
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 118 2e-26
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 118 2e-26
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 118 2e-26
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 118 2e-26
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 118 2e-26
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 118 2e-26
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 118 2e-26
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 118 2e-26
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 118 2e-26
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 116 6e-26
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 113 8e-25
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 113 8e-25
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 113 8e-25
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 113 8e-25
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 113 8e-25
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 108 2e-23
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 107 3e-23
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 107 3e-23
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 107 3e-23
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 95 2e-19
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 94 4e-19
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 94 4e-19
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 67 5e-11
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 67 5e-11
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 67 5e-11
AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open read... 33 1.3
AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens ... 31 5.2
AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens ... 31 5.2
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 119 bits (287), Expect = 9e-27
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 432 TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 491
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 492 KVDEAVAVL 500
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 119 bits (287), Expect = 9e-27
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 543 TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 602
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 603 KVDEAVAVL 611
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 119 bits (287), Expect = 9e-27
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 546 TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 605
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 606 KVDEAVAVL 614
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 119 bits (287), Expect = 9e-27
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 546 TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 605
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 606 KVDEAVAVL 614
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 119 bits (287), Expect = 9e-27
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 546 TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 605
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 606 KVDEAVAVL 614
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 119 bits (287), Expect = 9e-27
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 546 TASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRS 605
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 606 KVDEAVAVL 614
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 555 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 614
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 615 KVDEAVAVL 623
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 555 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 614
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 615 KVDEAVAVL 623
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 571 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 630
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 631 KVDEAVAVL 639
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 571 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 630
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 631 KVDEAVAVL 639
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 542 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 601
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 602 KVDEAVAVL 610
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 555 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 614
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 615 KVDEAVAVL 623
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 571 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 630
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 631 KVDEAVAVL 639
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 526 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 585
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 586 KVDEAVAVL 594
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 321 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 380
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 381 KVDEAVAVL 389
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 109 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 168
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 169 KVDEAVAVL 177
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 555 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 614
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 615 KVDEAVAVL 623
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 571 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 630
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 631 KVDEAVAVL 639
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 526 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 585
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 586 KVDEAVAVL 594
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 118 bits (284), Expect = 2e-26
Identities = 59/69 (85%), Positives = 63/69 (91%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 269 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 328
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 329 KVDEAVAVL 337
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 116 bits (280), Expect = 6e-26
Identities = 58/69 (84%), Positives = 62/69 (89%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++
Sbjct: 282 TASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRS 341
Query: 516 KVDEAVAVL 490
KVDEA AVL
Sbjct: 342 KVDEAAAVL 350
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 113 bits (271), Expect = 8e-25
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T + LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++
Sbjct: 541 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS 600
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 601 KVDEAVAVL 609
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 113 bits (271), Expect = 8e-25
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T + LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++
Sbjct: 541 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS 600
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 601 KVDEAVAVL 609
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 113 bits (271), Expect = 8e-25
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T + LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++
Sbjct: 541 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS 600
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 601 KVDEAVAVL 609
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 113 bits (271), Expect = 8e-25
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T + LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++
Sbjct: 541 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS 600
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 601 KVDEAVAVL 609
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 113 bits (271), Expect = 8e-25
Identities = 56/69 (81%), Positives = 62/69 (89%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T + LA+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++
Sbjct: 541 TASRLASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRS 600
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 601 KVDEAVAVL 609
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 108 bits (259), Expect = 2e-23
Identities = 56/69 (81%), Positives = 61/69 (88%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLA+AP QEQKQMLGE LFPLIQ MHP LAGKITG+LLEIDNSELLHML+ ESL +
Sbjct: 57 TVSMLASAP-QEQKQMLGEWLFPLIQAMHPTLAGKITGVLLEIDNSELLHMLKSPESLHS 115
Query: 516 KVDEAVAVL 490
KVDEAVAVL
Sbjct: 116 KVDEAVAVL 124
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 107 bits (258), Expect = 3e-23
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL A
Sbjct: 86 TASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHA 145
Query: 516 KVDEAVAVL 490
K+DEAVAVL
Sbjct: 146 KIDEAVAVL 154
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 107 bits (258), Expect = 3e-23
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL A
Sbjct: 532 TASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHA 591
Query: 516 KVDEAVAVL 490
K+DEAVAVL
Sbjct: 592 KIDEAVAVL 600
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 107 bits (258), Expect = 3e-23
Identities = 54/69 (78%), Positives = 59/69 (85%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL A
Sbjct: 532 TASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHA 591
Query: 516 KVDEAVAVL 490
K+DEAVAVL
Sbjct: 592 KIDEAVAVL 600
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 95.5 bits (227), Expect = 2e-19
Identities = 47/62 (75%), Positives = 52/62 (83%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL A
Sbjct: 86 TASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHA 145
Query: 516 KV 511
K+
Sbjct: 146 KI 147
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 94.3 bits (224), Expect = 4e-19
Identities = 47/61 (77%), Positives = 51/61 (83%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL A
Sbjct: 86 TASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHA 145
Query: 516 K 514
K
Sbjct: 146 K 146
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 94.3 bits (224), Expect = 4e-19
Identities = 47/61 (77%), Positives = 51/61 (83%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKA 517
T +MLAAAPL EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL A
Sbjct: 67 TASMLAAAPLHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHA 126
Query: 516 K 514
K
Sbjct: 127 K 127
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 67.3 bits (157), Expect = 5e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 672 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 493
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ +
Sbjct: 2388 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMEL 2447
Query: 492 L 490
+
Sbjct: 2448 I 2448
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 67.3 bits (157), Expect = 5e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 672 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 493
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ +
Sbjct: 2389 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMEL 2448
Query: 492 L 490
+
Sbjct: 2449 I 2449
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 67.3 bits (157), Expect = 5e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 672 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 493
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ +
Sbjct: 2411 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMEL 2470
Query: 492 L 490
+
Sbjct: 2471 I 2471
>AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 134
Score = 32.7 bits (71), Expect = 1.3
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3
Query: 696 TXTMLAAAPLQEQKQMLG 643
T +MLAAAPL EQKQM+G
Sbjct: 27 TASMLAAAPLHEQKQMIG 44
>AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ46362 fis, clone TESTI4050293. ).
Length = 679
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 660 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 523
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
>AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ43950 fis, clone TESTI4015293. ).
Length = 679
Score = 30.7 bits (66), Expect = 5.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 660 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 523
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,168,958
Number of Sequences: 237096
Number of extensions: 1221711
Number of successful extensions: 2403
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2403
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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