Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_G20
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC098419-1|AAH98419.1| 668|Homo sapiens TBC1D10B protein protein. 30 6.9
BC093816-1|AAH93816.1| 533|Homo sapiens TBC1 domain family, mem... 30 6.9
BC093814-1|AAH93814.1| 533|Homo sapiens TBC1 domain family, mem... 30 6.9
BC072453-1|AAH72453.2| 533|Homo sapiens TBC1 domain family, mem... 30 6.9
BC050523-1|AAH50523.2| 385|Homo sapiens TBC1D10B protein protein. 30 6.9
AL117408-1|CAB55908.1| 233|Homo sapiens hypothetical protein pr... 30 6.9
AK023192-1|BAB14454.1| 533|Homo sapiens protein ( Homo sapiens ... 30 6.9
AK002101-1|BAA92086.1| 289|Homo sapiens protein ( Homo sapiens ... 30 6.9
U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein. 30 9.1
D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein. 30 9.1
BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein. 30 9.1
BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich intera... 30 9.1
AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein. 30 9.1
AF154915-2|AAF79045.1| 338|Homo sapiens transcription factor HO... 30 9.1
AF134849-1|AAK27839.1| 139|Homo sapiens SMCY protein. 30 9.1
>BC098419-1|AAH98419.1| 668|Homo sapiens TBC1D10B protein protein.
Length = 668
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 570 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 629
Query: 427 QE 432
QE
Sbjct: 630 QE 631
>BC093816-1|AAH93816.1| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 435 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 494
Query: 427 QE 432
QE
Sbjct: 495 QE 496
>BC093814-1|AAH93814.1| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 435 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 494
Query: 427 QE 432
QE
Sbjct: 495 QE 496
>BC072453-1|AAH72453.2| 533|Homo sapiens TBC1 domain family, member
10B protein.
Length = 533
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 435 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 494
Query: 427 QE 432
QE
Sbjct: 495 QE 496
>BC050523-1|AAH50523.2| 385|Homo sapiens TBC1D10B protein protein.
Length = 385
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 287 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 346
Query: 427 QE 432
QE
Sbjct: 347 QE 348
>AL117408-1|CAB55908.1| 233|Homo sapiens hypothetical protein
protein.
Length = 233
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 135 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 194
Query: 427 QE 432
QE
Sbjct: 195 QE 196
>AK023192-1|BAB14454.1| 533|Homo sapiens protein ( Homo sapiens
cDNA FLJ13130 fis, clone NT2RP3002972, weakly similar to
Halocynthia roretzi mRNA for HrPET-1. ).
Length = 533
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 435 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 494
Query: 427 QE 432
QE
Sbjct: 495 QE 496
>AK002101-1|BAA92086.1| 289|Homo sapiens protein ( Homo sapiens
cDNA FLJ11239 fis, clone PLACE1008533. ).
Length = 289
Score = 30.3 bits (65), Expect = 6.9
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 250 GSQTKLLPGSERRGQRRPHECREGHR*-QHPGRQQESAGLERGRRLQEPHRERRVQRCTK 426
G+ T L E R Q + + +E R Q R++E E+ R QE RE++ + K
Sbjct: 191 GNSTPLGSSKETRKQEKERQKQEKERQKQEKEREKERQKQEKEREKQEKEREKQEKERQK 250
Query: 427 QE 432
QE
Sbjct: 251 QE 252
>U52191-1|AAC50806.1| 1539|Homo sapiens SMCY protein.
Length = 1539
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 331 QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQEL 435
+H G + S LER RR Q+ + R V+ +QEL
Sbjct: 1428 EHQGSRTRSRALERRRRRQKVDQGRNVENLVQQEL 1462
>D87072-1|BAA13241.2| 1512|Homo sapiens KIAA0234 protein.
Length = 1512
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 331 QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQEL 435
+H G + S LER RR Q+ + R V+ +QEL
Sbjct: 1401 EHQGSRTRSRALERRRRRQKVDQGRNVENLVQQEL 1435
>BC146767-1|AAI46768.1| 1482|Homo sapiens JARID1D protein protein.
Length = 1482
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 331 QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQEL 435
+H G + S LER RR Q+ + R V+ +QEL
Sbjct: 1371 EHQGSRTRSRALERRRRRQKVDQGRNVENLVQQEL 1405
>BC132721-1|AAI32722.1| 1539|Homo sapiens jumonji, AT rich interactive
domain 1D protein.
Length = 1539
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 331 QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQEL 435
+H G + S LER RR Q+ + R V+ +QEL
Sbjct: 1428 EHQGSRTRSRALERRRRRQKVDQGRNVENLVQQEL 1462
>AF273841-1|AAG00951.1| 1539|Homo sapiens SMCY protein.
Length = 1539
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 331 QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQEL 435
+H G + S LER RR Q+ + R V+ +QEL
Sbjct: 1428 EHQGSRTRSRALERRRRRQKVDQGRNVENLVQQEL 1462
>AF154915-2|AAF79045.1| 338|Homo sapiens transcription factor
HOXD11 protein.
Length = 338
Score = 29.9 bits (64), Expect = 9.1
Identities = 29/75 (38%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +1
Query: 235 ACGGGGSQ-TKLLPGSERRGQRRPHECREGHR*QHPGRQQESAGLERGRRLQEPHRERRV 411
A GGGGS TK PGSE +G EG G E AG E+ P R R+
Sbjct: 217 AGGGGGSPCTKATPGSEPKG------AAEGSGGDGEGPPGE-AGAEKSSSAVAPQRSRK- 268
Query: 412 QRC--TKQELPEAIR 450
+RC TK ++ E R
Sbjct: 269 KRCPYTKYQIRELER 283
>AF134849-1|AAK27839.1| 139|Homo sapiens SMCY protein.
Length = 139
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 331 QHPGRQQESAGLERGRRLQEPHRERRVQRCTKQEL 435
+H G + S LER RR Q+ + R V+ +QEL
Sbjct: 89 EHQGSRTRSRALERRRRRQKVDQGRNVENLVQQEL 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,395,717
Number of Sequences: 237096
Number of extensions: 1688250
Number of successful extensions: 7749
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7746
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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