Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_G20
         (700 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93378-4|CAE17803.1|  514|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical p...    28   7.4  
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z92796-4|CAB63231.1|  516|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z93378-4|CAE17803.1|  514|Caenorhabditis elegans Hypothetical
           protein F19H8.5 protein.
          Length = 514

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
 Frame = -1

Query: 568 VLFS--IFAAAVAKPSLVAPLAYSAVVPGVSSLSQYSTSVVHGSPLV-APALYN 416
           V+FS  IF+  +  PS+++P  +S  VP    LS Y  S    SPLV AP + N
Sbjct: 377 VIFSPNIFSPLILNPSVLSPWIFSPAVPLPFILSPYLLSPYIFSPLVMAPFILN 430


>Z70756-12|CAA94796.2|  180|Caenorhabditis elegans Hypothetical
           protein T06E4.10 protein.
          Length = 180

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 553 FAAAVAKPSLVAPLAYSAVVPGVSSLSQYSTSVVHGSPLVAPA 425
           +A A+  P+    LA  A  PG+++ +     VV  +P +APA
Sbjct: 53  YAPALGAPAYAPALAAPAYAPGLAAPAFAPAPVVAAAPALAPA 95


>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 390  FLQSPPSLKPRTLLLSSWMLLTVSLSTLMRSSLP 289
            FL  P  +K   +  S+W L   SL +++R+S+P
Sbjct: 1375 FLGEPLYMKYTCISASTWKLAATSLMSVLRTSIP 1408


>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -2

Query: 390  FLQSPPSLKPRTLLLSSWMLLTVSLSTLMRSSLP 289
            FL  P  +K   +  S+W L   SL +++R+S+P
Sbjct: 1375 FLGEPLYMKYTCISASTWKLAATSLMSVLRTSIP 1408


>AF106589-3|AAT81179.1|  511|Caenorhabditis elegans Hypothetical
           protein Y44E3A.4 protein.
          Length = 511

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -1

Query: 532 PSLVAPLAYSAVVPGVSSLSQYSTSVVHGSPLVAPA 425
           PS +AP A SA  P  S L+  STS     P +AP+
Sbjct: 302 PSTIAPAAPSAPAPAPSQLNPTSTSPT--MPAIAPS 335


>Z92796-4|CAB63231.1|  516|Caenorhabditis elegans Hypothetical
           protein H25K10.5 protein.
          Length = 516

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 78  HGDYLIENELI*NDYCITVKHCRIIL 1
           HG +LI  E +  D+CIT +  RI L
Sbjct: 303 HGPFLINLENLHPDFCITFREWRIFL 328


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,270,219
Number of Sequences: 27780
Number of extensions: 228097
Number of successful extensions: 578
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)