Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_G19
(806 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-31... 144 7e-35
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29... 143 2e-34
07_03_1774 + 29425486-29425831,29426018-29426235,29426337-294271... 135 3e-32
03_02_0665 - 10268959-10269148,10269344-10269936,10270572-102710... 134 8e-32
07_03_1076 + 23779941-23779988,23780102-23780191,23781580-237816... 32 0.62
01_01_1178 + 9385261-9385374,9385457-9385620,9386251-9386453,938... 30 1.9
>12_01_0038 - 312152-312748,312930-313362,313572-314440,314535-314584,
314589-315192,315674-315718,316100-316317,317020-317332,
318681-318716
Length = 1054
Score = 144 bits (349), Expect = 7e-35
Identities = 70/164 (42%), Positives = 104/164 (63%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPS 626
K I G+IIPAIAT+T++ G VCLELYK+ G +K+E ++N F NLA+P F +EP+ P
Sbjct: 889 KFIAGRIIPAIATSTAMATGLVCLELYKVLGGGHKVEDYRNTFANLAIPLFSMAEPVPPK 948
Query: 625 TNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLE 446
T + + WT+WDR+ + G ITL++ LD K E L +S G +LY+ P+ K E
Sbjct: 949 TIKHQDMAWTVWDRWTITGNITLRELLDWLK-EKGLNAYSISCGTSLLYNSMFPRHK--E 1005
Query: 445 RLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYV 314
RL+ + +V +V+K ++ P+ L + C DDD NDV++P V
Sbjct: 1006 RLDKKVVDVAREVAKVEVPPYRRHLDVVVACEDDDDNDVDIPLV 1049
>11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513,
295071-295646,295828-296260,296470-297338,297433-298227,
298709-298753,299135-299352,300055-300364,302715-302984
Length = 1331
Score = 143 bits (346), Expect = 2e-34
Identities = 69/162 (42%), Positives = 103/162 (63%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPS 626
K I G+IIPAIAT+T++ G VCLELYK+ G +K+E ++N F NLA+P F +EP+ P
Sbjct: 1013 KFIAGRIIPAIATSTAMATGLVCLELYKVLGGGHKVEDYRNTFANLAIPLFSMAEPVPPK 1072
Query: 625 TNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLE 446
T + + WT+WDR+ + G ITL++ LD K E L +S G +LY+ P+ K E
Sbjct: 1073 TIKHQDMAWTVWDRWTITGNITLRELLDWLK-EKGLNAYSISCGTSLLYNSMFPRHK--E 1129
Query: 445 RLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVP 320
RL+ + +V +V+K ++ P+ L + C DDD NDV++P
Sbjct: 1130 RLDKKVVDVAREVAKVEVPPYRRHLDVVVACEDDDDNDVDIP 1171
>07_03_1774 + 29425486-29425831,29426018-29426235,29426337-29427131,
29427206-29428074,29428317-29428749,29429263-29429859
Length = 1085
Score = 135 bits (327), Expect = 3e-32
Identities = 65/164 (39%), Positives = 99/164 (60%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPS 626
K I G+IIPAIAT+T++ G VCLELYK+ G + +E ++N F NLALP F +EP+ P
Sbjct: 920 KFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSMAEPVPPK 979
Query: 625 TNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLE 446
+ + WT+WDR+ +KG +T+ + L F ++ L +S G +LY+ A+ E
Sbjct: 980 VMKHQDMSWTVWDRWSIKGNLTVAELLQWF-SDKGLTAYSISCGTSLLYNNMF--ARHKE 1036
Query: 445 RLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYV 314
RLN + +V +V+K + + L C DDDGND+++P V
Sbjct: 1037 RLNKKVVDVAREVAKVDVPEYRKHLDLVAACEDDDGNDIDIPLV 1080
>03_02_0665 - 10268959-10269148,10269344-10269936,10270572-10271004,
10271172-10272040,10272121-10272915,10273612-10273829,
10274931-10275230,10276834-10277161
Length = 1241
Score = 134 bits (324), Expect = 8e-32
Identities = 62/164 (37%), Positives = 102/164 (62%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPS 626
K I G+IIPAIAT+T++ G VCLELYK+ G + +E ++N F NLA+P F +EP+ P
Sbjct: 1014 KFIAGRIIPAIATSTAMATGLVCLELYKVLAGGHPVEDYRNSFANLAIPMFSMAEPLPPK 1073
Query: 625 TNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLE 446
+ + +WT+WDR+ ++G IT+ + L + ++ L +S G +LY+ P+ K +
Sbjct: 1074 VIKHQDMRWTIWDRWSIEGNITVAELL-KWLSDKGLSAYSVSCGTSLLYNTMFPRHK--D 1130
Query: 445 RLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYV 314
R+N + +V +V+K + + L + C DDDGNDV++P +
Sbjct: 1131 RVNKKLVDVAKEVAKVDVPAYRRHLDVVVACEDDDGNDVDIPLI 1174
>07_03_1076 +
23779941-23779988,23780102-23780191,23781580-23781663,
23781792-23782010,23782873-23782974,23783809-23784207,
23784332-23784561,23784749-23784842,23784931-23785113,
23785254-23785351,23785831-23786143
Length = 619
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKLAQG 710
K + G I+ A+ATT +++AG + +E K+ G
Sbjct: 354 KGVAGNIVHAVATTNAIIAGLIVIEAIKVLHG 385
>01_01_1178 +
9385261-9385374,9385457-9385620,9386251-9386453,
9387130-9387362,9387584-9387640,9388120-9388241,
9388366-9388425,9388426-9388543,9389005-9389286
Length = 450
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -2
Query: 787 IIPAIATTTSVVAGXVCLELYKLAQGFNK 701
IIPAIA+T ++V+ LE KL G +K
Sbjct: 263 IIPAIASTNAIVSAACALEALKLISGCSK 291
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,323,549
Number of Sequences: 37544
Number of extensions: 448192
Number of successful extensions: 1206
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1200
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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