Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_G19
(806 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 177 6e-45
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 177 6e-45
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 34 0.14
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 31 0.73
Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 29 5.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 9.0
U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical pr... 28 9.0
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 28 9.0
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 177 bits (432), Expect = 6e-45
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKL--AQGFNK--LEVFKNGFVNLALPFFGFSEP 638
K I GKIIPAIATTT+ VAG VC+ELYK+ A G K +E FKN F+NL++PFF +EP
Sbjct: 856 KQIAGKIIPAIATTTAAVAGLVCIELYKVVDANGIPKTPMERFKNTFLNLSMPFFSSAEP 915
Query: 637 IAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHK-LEITMLSQGVCMLYSFFMPK 461
I TY + ++TLWDR +V+G +TLQ+F+D+ +N+ E++MLS G C+L+SFFM
Sbjct: 916 IGAPKKTYMDREFTLWDRIDVQGPLTLQEFIDNVQNQTGGCEVSMLSAGACLLFSFFMNA 975
Query: 460 AKRLERLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYVKYT 305
K+ ERL + V ++ KK L P V+ALV E +D DG DVEVPY++Y+
Sbjct: 976 GKKQERLKTEVKAVYEELLKKSLHPSVHALVLEPMMSDPDGEDVEVPYIRYS 1027
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 177 bits (432), Expect = 6e-45
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 5/172 (2%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKL--AQGFNK--LEVFKNGFVNLALPFFGFSEP 638
K I GKIIPAIATTT+ VAG VC+ELYK+ A G K +E FKN F+NL++PFF +EP
Sbjct: 941 KQIAGKIIPAIATTTAAVAGLVCIELYKVVDANGIPKTPMERFKNTFLNLSMPFFSSAEP 1000
Query: 637 IAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHK-LEITMLSQGVCMLYSFFMPK 461
I TY + ++TLWDR +V+G +TLQ+F+D+ +N+ E++MLS G C+L+SFFM
Sbjct: 1001 IGAPKKTYMDREFTLWDRIDVQGPLTLQEFIDNVQNQTGGCEVSMLSAGACLLFSFFMNA 1060
Query: 460 AKRLERLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYVKYT 305
K+ ERL + V ++ KK L P V+ALV E +D DG DVEVPY++Y+
Sbjct: 1061 GKKQERLKTEVKAVYEELLKKSLHPSVHALVLEPMMSDPDGEDVEVPYIRYS 1112
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -2
Query: 805 KLIXGKIIPAIATTTSVVAGXVCLELYKLAQG 710
K + G IIPAIA+T ++VAG + E ++ +G
Sbjct: 367 KAMAGNIIPAIASTNAIVAGIIVTEAVRVIEG 398
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 31.5 bits (68), Expect = 0.73
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = -2
Query: 790 KIIPAIATTTSVVAGXVCLELYKLAQGFNK-LEVFKNGFVNLALPFFGFSEPIAPSTNTY 614
+IIPA+A+T +V+A LE KLA K ++ + N F + + + N
Sbjct: 281 RIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLN-FTQIHGAYTSVVS-MMKDDNCL 338
Query: 613 NENKWTLWDRFEVKGEITLQQFLDHFKNEHKLEITMLSQGVCMLY--SFFMPKAKRLERL 440
+ L FEV TL+ + L+ L+ LY S FMP+ ++ +
Sbjct: 339 TCSGGRL--PFEVSPSSTLESLIIRLSERFHLKHPTLATSTRKLYCISSFMPQFEQESKE 396
Query: 439 NLPMS 425
NL S
Sbjct: 397 NLHTS 401
>Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical
protein C32C4.7 protein.
Length = 536
Score = 30.3 bits (65), Expect = 1.7
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -3
Query: 330 WRSRM*NTLCLSLFNVILSPPKVVQKNNSYH 238
++ R+ NT+C ++ V + PPK++ ++ Y+
Sbjct: 205 FQERLMNTVCAFIYQVFMKPPKMISYSHPYY 235
>Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical
protein C16C2.4 protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 433 PMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEV 323
P S K KK+ EP V V E C D+D + E+
Sbjct: 261 PQSSSEIKEEKKENEPEVKETVSEESCEDEDEEEEEL 297
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 617 GIGRRRDRFRETEEGQGKVDEAI 685
G R+RD+FR+ EEG+ DE I
Sbjct: 9 GKRRKRDQFRDMEEGEASDDEEI 31
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 688 KNGFVNLALPFFGFSEPIAPSTN 620
KNG + + FFGFSE I+P N
Sbjct: 90 KNGVLKVRFFFFGFSEFISPEPN 112
>U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical
protein B0207.8 protein.
Length = 141
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 691 FKNGFVNLALPFFGFSEPIAPSTNTYNENKWTLWDR 584
FKNGF + F F + +ENKW L R
Sbjct: 99 FKNGFCENTMKFVNFQNINRSTNEILDENKWHLMYR 134
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 309 YFTYGTSTSFPSSSLQHNSKTNAFTCGSNFFLDTFVTTSDIGRFNRSS 452
YF G STS + +HN+++ T GSN + ++ S+I R + S
Sbjct: 73 YFP-GISTSLINVQREHNNRSKYDTWGSNSCSEPRISISNIERLEKPS 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,393,672
Number of Sequences: 27780
Number of extensions: 394725
Number of successful extensions: 1050
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1046
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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