Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_G17
         (838 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   0.86 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   0.86 
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   6.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.1  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   8.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.1  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 285  RSKRPDLSRAGSKMSTLLVAAMTLMSAVELKPSSWFNNSN 404
            RS RP+LS A   + +L    + L S++  +PS+  N S+
Sbjct: 1878 RSDRPELSEAECDIDSLKKLKLGLRSSLWSRPSTQNNPSS 1917


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +3

Query: 285  RSKRPDLSRAGSKMSTLLVAAMTLMSAVELKPSSWFNNSN 404
            RS RP+LS A   + +L    + L S++  +PS+  N S+
Sbjct: 1874 RSDRPELSEAECDIDSLKKLKLGLRSSLWSRPSTQNNPSS 1913


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 254 FFIGMRKFDFSVQTSRSEQGRVQNVHSIGS 343
           FF+ +  F +    SRSE+    NV+S G+
Sbjct: 434 FFLAINVFYWFAYLSRSERINYYNVNSNGT 463


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 515 CKGVTDKLGTITNEHLHKLWTSQLQKCRLCLSSASSRQQCL 637
           C+ V  +L    N  L + +   LQ+C L L     R  CL
Sbjct: 413 CEKVAKQLVNSVN-CLRESFIGTLQRCLLSLEKTYERDTCL 452


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +2

Query: 515 CKGVTDKLGTITNEHLHKLWTSQLQKCRLCLSSASSRQQCL 637
           C+ V  +L    N  L + +   LQ+C L L     R  CL
Sbjct: 451 CEKVAKQLVNSVN-CLRESFIGTLQRCLLSLEKTYERDTCL 490


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 649 EVHIKELLWVDGCRXSQISPC 711
           ++  +EL+W  G +   IS C
Sbjct: 429 DIRTEELIWARGTKDIPISAC 449


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 372 LKPSSWFNNSNIVRCTSRSPAFSESKRFVPMASSSSMK 485
           +K ++W    + +  T   PAF   K ++   ++ SM+
Sbjct: 489 IKQNTWTVFRDAITQTGTGPAFLTIKEWIERGTTKSME 526


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 224 RMDLHNSSSGFFIGMRKFDFS 286
           R  +HNSS+  F+    FDF+
Sbjct: 304 RESIHNSSNARFLMDSMFDFA 324


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 649 EVHIKELLWVDGCRXSQISPC 711
           ++  +EL+W  G +   IS C
Sbjct: 519 DIRTEELIWARGTKDIPISAC 539


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,522
Number of Sequences: 438
Number of extensions: 5721
Number of successful extensions: 23
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)