Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_G15
         (401 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35 pro...    76   5e-14
CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.                76   5e-14
BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35 p...    76   5e-14
BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35 p...    76   5e-14
BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.        76   5e-14
BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35 p...    76   5e-14
AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35 p...    76   5e-14
AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35 p...    52   7e-07
AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35 p...    46   5e-05

>U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score = 75.8 bits (178), Expect = 5e-14
 Identities = 50/112 (44%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -3

Query: 333 MGKVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV 154
           M K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V
Sbjct: 1   MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60

Query: 153 *HQKMKGKLRNHDKNKTDKP*X*RAXKTRAMRQALTTHEAK-RPXRGKRAER 1
            +Q  K  LR   K K  KP   R  KTRAMR+ L  HE   +  + +R ER
Sbjct: 61  INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKER 112


>AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35
           protein.
          Length = 95

 Score = 52.0 bits (119), Expect = 7e-07
 Identities = 34/78 (43%), Positives = 38/78 (48%)
 Frame = -3

Query: 327 KVKCSELRTXXXXXXXXXXXXXXXXXXXLRVAKVTGGVAXKLSKIRVVRKASARVYIV*H 148
           K+K  +LR                    LRVAKVTGG A KLSKIRVVRK+ ARV  V +
Sbjct: 2   KIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVIN 61

Query: 147 QKMKGKLRNHDKNKTDKP 94
           Q  K  LR   K     P
Sbjct: 62  QTQKENLRKFYKAAAGGP 79


>AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35
           protein.
          Length = 33

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 24/32 (75%), Positives = 26/32 (81%)
 Frame = -3

Query: 240 RVAKVTGGVAXKLSKIRVVRKASARVYIV*HQ 145
           RVAKVTGG A KLSKIRVVRK+ ARV  V +Q
Sbjct: 2   RVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,931,344
Number of Sequences: 237096
Number of extensions: 500360
Number of successful extensions: 1041
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)