Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_G07
         (484 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL162417-13|CAI13418.1|  294|Homo sapiens globoside alpha-1,3-N-...    29   8.6  
AK074639-1|BAC11106.1|  294|Homo sapiens 40).  protein.                29   8.6  

>AL162417-13|CAI13418.1|  294|Homo sapiens globoside
           alpha-1,3-N-acetylgalactosaminyltransferase 1 protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 53  SLFWTXCWGLFG*LKPWE 106
           +L WT C+G  G L+PWE
Sbjct: 198 ALMWTWCFGTRGALRPWE 215


>AK074639-1|BAC11106.1|  294|Homo sapiens 40).  protein.
          Length = 294

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 53  SLFWTXCWGLFG*LKPWE 106
           +L WT C+G  G L+PWE
Sbjct: 198 ALMWTWCFGTRGALRPWE 215


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,832,162
Number of Sequences: 237096
Number of extensions: 760980
Number of successful extensions: 5993
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5993
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)