Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F24
(389 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 109 1e-23
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 108 3e-23
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 104 7e-22
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 93 1e-18
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 60 1e-08
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 58 8e-08
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 53 2e-06
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 47 1e-04
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 39 0.040
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 38 0.052
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.21
UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein; ... 34 1.1
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 33 1.5
UniRef50_Q7SG34 Cluster: Predicted protein; n=1; Neurospora cras... 33 2.0
UniRef50_A3NL63 Cluster: Putative uncharacterized protein; n=1; ... 32 3.4
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 3.4
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 3.4
UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15; Eurya... 32 3.4
UniRef50_Q5KA62 Cluster: Gata factor srep, putative; n=3; Filoba... 32 4.5
UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;... 32 4.5
UniRef50_UPI000069FF5A Cluster: Dynamin-binding protein (Scaffol... 31 6.0
UniRef50_Q5CQT1 Cluster: Large low complexity protein with signa... 31 6.0
UniRef50_A3ZZS9 Cluster: Hemocyanin type 1-like protein; n=1; Bl... 31 7.9
UniRef50_A5DKX7 Cluster: Putative uncharacterized protein; n=1; ... 31 7.9
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 109 bits (263), Expect = 1e-23
Identities = 61/106 (57%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = -2
Query: 325 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSFXXXX 146
MVNVPK RRT+ V+QYKK K+ AQGRRRYDRKQ GYGGQ+KP F
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKA 60
Query: 145 XXXXKIVXR-T*VC*LXR*ETQVALKRCKHFELGGDKKRKGQMIQF 11
KIV R V R + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 108 bits (260), Expect = 3e-23
Identities = 60/106 (56%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Frame = -2
Query: 325 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSFXXXX 146
MVNVPK RRT+ V+QYKK K+ AQG+RRYDRKQ GYGGQ+KP F
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKA 60
Query: 145 XXXXKIVXR-T*VC*LXR*ETQVALKRCKHFELGGDKKRKGQMIQF 11
KIV R V R + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 61 KTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 104 bits (249), Expect = 7e-22
Identities = 57/106 (53%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Frame = -2
Query: 325 MVNVPKQRRTYXXXX-XXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSFXXX 149
MVNVPK RRT+ V+QYKK KE AQGRRRYDRKQ G+GGQ+KP F
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 148 XXXXXKIVXRT*VC*LXR*ETQVALKRCKHFELGGDKKRKGQMIQF 11
KIV R C + + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 61 AKTTKKIVLRM-ECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 93.5 bits (222), Expect = 1e-18
Identities = 52/101 (51%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = -2
Query: 322 VNVPKQRRTYXXXXX--XXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSFXXX 149
VNVPK ++TY V+QYKK K+ AAQG+RRYDRKQ GYGGQ+KP F
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 148 XXXXXKIVXRT*VC*LXR*ETQVALKRCKHFELGGDKKRKG 26
KIV R C + +Q +KRCKHFE+GGDKK KG
Sbjct: 108 AKTTKKIVLRL-QCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 60.1 bits (139), Expect = 1e-08
Identities = 37/99 (37%), Positives = 51/99 (51%)
Frame = -2
Query: 325 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSFXXXX 146
MV+ PK ++ + VSQ + +ERH+A GRRRYDRKQ+G+GG+ KP
Sbjct: 1 MVHHPKTKKFFCKFCKKHTMCKVSQASRGEERHSALGRRRYDRKQKGFGGRVKPILRRSK 60
Query: 145 XXXXKIVXRT*VC*LXR*ETQVALKRCKHFELGGDKKRK 29
KI R C + T L R + FE +KK+K
Sbjct: 61 KTSKKISLRF-TCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 57.6 bits (133), Expect = 8e-08
Identities = 34/92 (36%), Positives = 46/92 (50%)
Frame = -2
Query: 325 MVNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSFXXXX 146
MV P+ ++ Y +YK K AQG+RRYDRKQQGYGGQ+KP F
Sbjct: 1 MVKYPRNQKKYCKFCKVHVEMKSYEYKPGKASLNAQGKRRYDRKQQGYGGQTKPVFRKQV 60
Query: 145 XXXXKIVXRT*VC*LXR*ETQVALKRCKHFEL 50
K + C + + E +LKR K F++
Sbjct: 61 KNTKKPSIKL-SCEICKKEFIKSLKRTKRFQI 91
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 53.2 bits (122), Expect = 2e-06
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = -2
Query: 253 QYKKSKERHAAQGRRRYDRKQQGYGGQSKPSF 158
QYKK K+ QG+RRYDRKQQG+GGQ+KP F
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVF 40
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = -2
Query: 313 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKP 164
PK+ RTY V+QY+ K R A G RRY RKQ+GYG Q +P
Sbjct: 4 PKRIRTYCPRCNTHTEHRVAQYRAGKRRAMALGERRYRRKQEGYGSQRRP 53
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 38.7 bits (86), Expect = 0.040
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -2
Query: 88 TQVALKRCKHFELGGDKKRKG 26
+Q +KRCKHFE+GGDKK KG
Sbjct: 65 SQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 38.3 bits (85), Expect = 0.052
Identities = 21/50 (42%), Positives = 25/50 (50%)
Frame = -2
Query: 313 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKP 164
PKQ R Y VS YK K R +A G RR+ ++GYGGQ P
Sbjct: 4 PKQIRRYCPKCKKHTTQKVSIYKAGKRRASAIGERRHAEDKKGYGGQKFP 53
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.21
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = -2
Query: 79 ALKRCKHFELGGDKKRKG 26
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q3AV77 Cluster: Possible peptidase S26 family protein;
n=2; Synechococcus|Rep: Possible peptidase S26 family
protein - Synechococcus sp. (strain CC9902)
Length = 127
Score = 33.9 bits (74), Expect = 1.1
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 252 STKSPRKGTLPRVEDVMIVNSRVTVVSPNPASKRRQKPLRKL 127
ST S + G +PR + +V SRVT NP++K QK +L
Sbjct: 80 STDSRQLGPIPRSALIGVVTSRVTPAKKNPSTKTNQKSQNQL 121
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 33.5 bits (73), Expect = 1.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 322 VNVPKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKPSF 158
+ +PK+ TY V + +K K G+RR+ R GYGG +P F
Sbjct: 1 MKMPKKIMTYCPYCKKHTSHSVERVRKRKASELKAGQRRFRRVTSGYGGFPRPKF 55
>UniRef50_Q7SG34 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 540
Score = 33.1 bits (72), Expect = 2.0
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = -3
Query: 306 SAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPASKRRQKPLRKL 127
SA T +N+ A+KYTR+ S + LP E V S +T + K +R
Sbjct: 176 SAPDTPENMFASKYTRWPSETAISDSILPSSE----VTSEITEFDEEDDESSKLKGIRYP 231
Query: 126 CXGL-ECADXQGERHRLH*RDASTLSLV 46
GL + A+ Q +R R +D S L L+
Sbjct: 232 GMGLFDSANEQQKRKRNQRKDESVLKLM 259
>UniRef50_A3NL63 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 668|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 668)
Length = 147
Score = 32.3 bits (70), Expect = 3.4
Identities = 24/87 (27%), Positives = 34/87 (39%)
Frame = -3
Query: 312 QNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPASKRRQKPLR 133
+ A R + A R T PR+ PR + ++R A++RR +P R
Sbjct: 43 RRGANRRKPDHRADARRRARRTSRPRRARYPRASRIAQRDTRHATRDTRHATRRRARPRR 102
Query: 132 KLCXGLECADXQGERHRLH*RDASTLS 52
C AD +G R RD T S
Sbjct: 103 ASCR--LSADVRGRRAAHSPRDTETSS 127
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 3.4
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 231 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 320
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 3.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 244 FCTVIPCVLCGIYIFCSTSC 303
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_O59603 Cluster: 50S ribosomal protein L44E; n=15;
Euryarchaeota|Rep: 50S ribosomal protein L44E -
Pyrococcus horikoshii
Length = 94
Score = 32.3 bits (70), Expect = 3.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 313 PKQRRTYXXXXXXXXXXXVSQYKKSKERHAAQGRRRYDRKQQGYGGQSKP 164
PKQ RTY V + K+ + G+RR+ R +GYGG +P
Sbjct: 4 PKQIRTYCPYCKRHTIHKVERVKRRPRSELSAGQRRFRRVLKGYGGFPRP 53
>UniRef50_Q5KA62 Cluster: Gata factor srep, putative; n=3;
Filobasidiella neoformans|Rep: Gata factor srep, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1060
Score = 31.9 bits (69), Expect = 4.5
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 240 PR-KGTLPRVEDVMIVNSRVTVVSPNPASKRRQKPLRKLCXGLECADXQGER 88
PR K R D+++ + RV+ VSPNPA++ A QGE+
Sbjct: 956 PRDKSEAERNRDILLASRRVSAVSPNPATRAAAASRESAASSNGSAPQQGEK 1007
>UniRef50_P39940 Cluster: E3 ubiquitin-protein ligase RSP5; n=31;
Dikarya|Rep: E3 ubiquitin-protein ligase RSP5 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 809
Score = 31.9 bits (69), Expect = 4.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 309 NSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVM 202
N++ T N ++T TR HST P +GT VE +
Sbjct: 158 NTSSTTRTNGHSTSSTRNHSTSHPSRGTAQAVESTL 193
>UniRef50_UPI000069FF5A Cluster: Dynamin-binding protein (Scaffold
protein Tuba).; n=7; Tetrapoda|Rep: Dynamin-binding
protein (Scaffold protein Tuba). - Xenopus tropicalis
Length = 1551
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 119 DLSVLIXKVRDTGCIEEMQAL*AWW*QEEKGTDD 18
DLSV + VR++ C++ + A+ W +KGT D
Sbjct: 1031 DLSVYLQHVRESACVKVLAAMSMWDLYSDKGTSD 1064
>UniRef50_Q5CQT1 Cluster: Large low complexity protein with signal
peptide, within large locus of signal peptide containing
proteins; n=3; Cryptosporidium|Rep: Large low complexity
protein with signal peptide, within large locus of
signal peptide containing proteins - Cryptosporidium
parvum Iowa II
Length = 2929
Score = 31.5 bits (68), Expect = 6.0
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = -3
Query: 312 QNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPASKR 151
+ S G ++N N + + HS + P+K LP+ ++ + + + +P +KR
Sbjct: 357 ETSEGEVSENENGKRNNKRHSKRRPKKPKLPKKWEIFTDDEKQEWLDRHPRTKR 410
>UniRef50_A3ZZS9 Cluster: Hemocyanin type 1-like protein; n=1;
Blastopirellula marina DSM 3645|Rep: Hemocyanin type
1-like protein - Blastopirellula marina DSM 3645
Length = 750
Score = 31.1 bits (67), Expect = 7.9
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +1
Query: 253 VIPCVLCGIYIFCSTSCAVLVRSPFLSSFGTISTNVKEHRPAEFI 387
VI C+LCG I + AVL + +G ++++++ H P +++
Sbjct: 256 VILCLLCGTLILTKSRTAVLAVVAGMGLWGILASSLRRHLPWKYL 300
>UniRef50_A5DKX7 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 270
Score = 31.1 bits (67), Expect = 7.9
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = +3
Query: 27 PFLFLSPPSSKCLHLFNATCVSHLXNQHTQVRXTIFLVVFAFFLKLG 167
P + S C +F A S N H + F+ F FF+ +G
Sbjct: 82 PLIAASGTGMACCMMFLAISTSQKHNSHANIASVFFIFAFNFFIPIG 128
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 340,717,400
Number of Sequences: 1657284
Number of extensions: 5571561
Number of successful extensions: 16343
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 16006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16335
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 16143318346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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