Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F23
(443 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 233 1e-60
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 221 4e-57
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 220 1e-56
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 218 4e-56
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 214 6e-55
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 204 5e-52
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 197 8e-50
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 192 2e-48
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 192 4e-48
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 190 9e-48
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 186 1e-46
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 186 3e-46
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 180 1e-44
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 178 4e-44
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 174 6e-43
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 171 4e-42
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 159 3e-38
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 118 1e-37
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 156 2e-37
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 152 3e-36
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 148 6e-35
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 137 9e-32
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 136 3e-31
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 136 3e-31
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 134 6e-31
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 132 2e-30
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 132 3e-30
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 130 1e-29
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 130 2e-29
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 129 3e-29
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 129 3e-29
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 128 5e-29
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 128 7e-29
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 124 7e-28
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 124 9e-28
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 124 9e-28
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 123 2e-27
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 123 2e-27
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 123 2e-27
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 122 3e-27
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 122 3e-27
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 119 2e-26
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 119 2e-26
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 119 2e-26
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 118 4e-26
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 117 1e-25
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 117 1e-25
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 116 2e-25
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 116 3e-25
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 114 7e-25
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 113 1e-24
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 113 2e-24
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 110 1e-23
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 110 2e-23
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 109 2e-23
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 109 2e-23
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 109 3e-23
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 107 1e-22
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 103 2e-21
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 102 3e-21
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 102 4e-21
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 101 9e-21
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 100 1e-20
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 100 3e-20
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 97 1e-19
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 97 2e-19
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 2e-19
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 96 3e-19
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 95 5e-19
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 8e-19
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 93 2e-18
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 91 7e-18
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 90 2e-17
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 89 5e-17
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 89 5e-17
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 87 1e-16
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 87 2e-16
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 85 9e-16
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 84 1e-15
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 82 6e-15
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 73 3e-12
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 64 1e-09
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 59 4e-08
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 56 3e-07
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 56 5e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 8e-07
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 53 3e-06
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 1e-05
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 50 2e-05
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 47 2e-04
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 46 3e-04
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 46 4e-04
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 45 8e-04
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 44 0.001
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 44 0.001
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 44 0.001
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 42 0.006
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.008
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 40 0.024
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.032
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 40 0.032
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 38 0.074
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 38 0.097
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 37 0.22
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 36 0.39
UniRef50_Q5KZD0 Cluster: Cytochrome c oxidase (B(O/a)3-type) cha... 36 0.39
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 36 0.39
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 36 0.52
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 35 0.91
UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA - Su... 34 1.6
UniRef50_A3ESP7 Cluster: Cbb3-type cytochrome oxidase, subunit 1... 33 3.7
UniRef50_UPI00015BC923 Cluster: UPI00015BC923 related cluster; n... 32 4.8
UniRef50_Q1H1D5 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 32 6.4
UniRef50_Q73P94 Cluster: Membrane protein, putative; n=1; Trepon... 31 8.5
UniRef50_A5DV48 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 233 bits (571), Expect = 1e-60
Identities = 108/146 (73%), Positives = 126/146 (86%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
GLLGF+V AHH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L
Sbjct: 194 GLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLW 253
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGFVFLFTVGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS+GAVFA + G + +P F
Sbjct: 254 TLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLF 313
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXF 5
TG++LN++ LKIQF +FIGVN+T F
Sbjct: 314 TGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 221 bits (541), Expect = 4e-57
Identities = 101/147 (68%), Positives = 123/147 (83%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
GLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L
Sbjct: 281 GLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLW 340
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS+GAVFA + GF++ +P F
Sbjct: 341 ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLF 400
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG +LNS KI F +FIGVN+T FP
Sbjct: 401 TGYTLNSVWTKIHFGVMFIGVNLTFFP 427
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 220 bits (538), Expect = 1e-56
Identities = 98/147 (66%), Positives = 124/147 (84%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L
Sbjct: 281 GFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLW 340
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS+GAVFA +GGFI+ +P F
Sbjct: 341 ALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLF 400
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
+G +L+ KI F +FIGVN+T FP
Sbjct: 401 SGYTLDQTYAKIHFTIMFIGVNLTFFP 427
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 218 bits (533), Expect = 4e-56
Identities = 100/147 (68%), Positives = 122/147 (82%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
GLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L
Sbjct: 281 GLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLW 340
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS+GAVFA + GF++ +P F
Sbjct: 341 ALGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLF 400
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG +L+ KI F +FIGVN+T FP
Sbjct: 401 TGYTLHDTWTKIHFGVMFIGVNLTFFP 427
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 214 bits (523), Expect = 6e-55
Identities = 97/147 (65%), Positives = 119/147 (80%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGFIV AHH+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL
Sbjct: 265 GFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILW 324
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+FLFTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS+GAVF+ +GGFI +P F
Sbjct: 325 TMGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMF 384
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
GL +N Y LKI F+ FIGVN+ FP
Sbjct: 385 FGLMMNEYFLKIHFYLTFIGVNLIFFP 411
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 204 bits (499), Expect = 5e-52
Identities = 93/139 (66%), Positives = 118/139 (84%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
GLLGFIV AHH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L
Sbjct: 46 GLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLW 105
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFTVGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS+GAVFA +GGF++ +P F
Sbjct: 106 ALGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLF 165
Query: 82 TGLSLNSYILKIQFFTIFI 26
+G +L++ KI F +F+
Sbjct: 166 SGYTLHNTWTKIHFGVMFM 184
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 197 bits (481), Expect = 8e-50
Identities = 89/147 (60%), Positives = 114/147 (77%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+LGF+V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P +L
Sbjct: 281 GILGFVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLF 340
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGFVF+FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS+GAVFA G+ P
Sbjct: 341 ALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKI 400
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
GL N K F+ +F GVN+T FP
Sbjct: 401 LGLDYNLLYSKAHFWVLFTGVNLTFFP 427
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 192 bits (469), Expect = 2e-48
Identities = 90/147 (61%), Positives = 114/147 (77%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+LGFIV AHH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L
Sbjct: 288 GVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLF 347
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+FLFT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS+GAVFA GF +
Sbjct: 348 AIGFIFLFTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKI 407
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TGL + +I F++ FIGVN+T P
Sbjct: 408 TGLQYPETLGQIHFWSTFIGVNLTFMP 434
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 192 bits (467), Expect = 4e-48
Identities = 88/147 (59%), Positives = 115/147 (78%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
GLLGFIV +HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L
Sbjct: 307 GLLGFIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLF 366
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGFV +FT+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS+GAVFA G+ P
Sbjct: 367 ALGFVVMFTIGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKI 426
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
GLS ++ KI F+ +FIGVN+T FP
Sbjct: 427 IGLSYDTKASKIHFWILFIGVNLTFFP 453
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 190 bits (464), Expect = 9e-48
Identities = 89/147 (60%), Positives = 111/147 (75%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L
Sbjct: 283 GVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLF 342
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+FLFT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS+GAVFA GF
Sbjct: 343 AVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKI 402
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
G + + +I F+ F GVN+T FP
Sbjct: 403 FGRTYPETLGQIHFWITFFGVNLTFFP 429
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 186 bits (454), Expect = 1e-46
Identities = 90/149 (60%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPXI 269
G+LGFIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + +
Sbjct: 246 GVLGFIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPM 305
Query: 268 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YP 89
LGF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS+GAVFA GGF +
Sbjct: 306 AWALGFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFG 365
Query: 88 XFTGLSLNSYILKIQFFTIFIGVNITXFP 2
TG + I F+ +F+GVNIT FP
Sbjct: 366 KITGYAYKDIYGLIHFWLMFLGVNITFFP 394
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 186 bits (452), Expect = 3e-46
Identities = 82/126 (65%), Positives = 106/126 (84%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+LGF+V AHH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + +
Sbjct: 258 GVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFW 317
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS+GAVFA GF + +P F
Sbjct: 318 ALGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLF 377
Query: 82 TGLSLN 65
+G +L+
Sbjct: 378 SGYNLH 383
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 180 bits (438), Expect = 1e-44
Identities = 79/147 (53%), Positives = 108/147 (73%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G++GF+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++
Sbjct: 323 GVVGFVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVW 382
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS+GAVF GF +P
Sbjct: 383 ALGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKM 442
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
+G N ++ ++ F+ F GVN+ FP
Sbjct: 443 SGKMYNEFLGQLHFWVFFAGVNLLFFP 469
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 178 bits (434), Expect = 4e-44
Identities = 84/133 (63%), Positives = 103/133 (77%)
Frame = -2
Query: 400 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVFLFTVGGLT 221
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 220 GVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLNSYILKIQF 41
G++LANSS+DI LHDTYYVVAHFHYVLS+GAVFA + GF + +P FTG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 40 FTIFIGVNITXFP 2
+F GVN+T FP
Sbjct: 416 GVMFTGVNLTFFP 428
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 174 bits (424), Expect = 6e-43
Identities = 83/148 (56%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPXIL 266
GL+GFIV AHH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P
Sbjct: 284 GLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF 343
Query: 265 *RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPX 86
GFV LFT+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS+GAVFA GGF +
Sbjct: 344 -AAGFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGK 402
Query: 85 FTGLSLNSYILKIQFFTIFIGVNITXFP 2
TGLS + + + F+ FIGVN T FP
Sbjct: 403 MTGLSYSESLGQAHFWMTFIGVNFTFFP 430
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 171 bits (417), Expect = 4e-42
Identities = 82/148 (55%), Positives = 105/148 (70%), Gaps = 3/148 (2%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPXIL 266
+GF+V HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P
Sbjct: 286 MGFLVWGHHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTF 345
Query: 265 *RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPX 86
+G V LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS+GAVFA GGF +P
Sbjct: 346 WAIGVVLLFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPF 405
Query: 85 FTGLSLNSYILKIQFFTIFIGVNITXFP 2
+TG+ ++ F FIGVN T FP
Sbjct: 406 WTGMVPRKDLVLTHFMLTFIGVNFTFFP 433
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 159 bits (385), Expect = 3e-38
Identities = 72/146 (49%), Positives = 98/146 (67%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+LG V HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P
Sbjct: 292 VLGTSVWGHHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWT 351
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
F+FLFTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS+GA++ GF P
Sbjct: 352 YSFIFLFTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMY 411
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G+S +S ++ F F+G N+T FP
Sbjct: 412 GISFDSVMMMAVFVCFFVGTNMTFFP 437
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 118 bits (284), Expect(2) = 1e-37
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 14/100 (14%)
Frame = -2
Query: 415 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVFLFT 236
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 235 VGGL--------------TGVILANSSIDITLHDTYYVVA 158
+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 409 IGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 60.1 bits (139), Expect(2) = 1e-37
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = -2
Query: 178 DTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLNSYILKIQFFTIFIGVNITXFP 2
+T + HFHYVLS+GAVFA G+ P G + + + K+QF+ +FIGVN T FP
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFP 534
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 156 bits (378), Expect = 2e-37
Identities = 77/131 (58%), Positives = 89/131 (67%)
Frame = -2
Query: 394 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVFLFTVGGLTGV 215
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P +L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 214 ILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLNSYILKIQFFT 35
+LANSS+DI LHDTYYVVAHFHYVLS+GA P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 34 IFIGVNITXFP 2
FP
Sbjct: 121 NIFSCKFNIFP 131
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 152 bits (369), Expect = 3e-36
Identities = 71/147 (48%), Positives = 98/147 (66%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGF+V AHH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++
Sbjct: 386 GGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMF 445
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFT+GG TG+IL+ + +D HDTYYVVAHFHYV+S+GAVF
Sbjct: 446 ALGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKM 505
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
+G + ++ F+ FIG NIT FP
Sbjct: 506 SGRQYPEWAGQVHFWVFFIGTNITFFP 532
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 148 bits (358), Expect = 6e-35
Identities = 74/147 (50%), Positives = 89/147 (60%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGFIV A LAT+HG I ++P +L
Sbjct: 282 GFLGFIVWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWLATLHGGTIKWDPPMLW 341
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS+GAVFA + GF + +P F
Sbjct: 342 ALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLF 401
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG +LNS K F +F GVN+T FP
Sbjct: 402 TGYTLNSAWAKAHFGVMFTGVNLTFFP 428
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 137 bits (332), Expect = 9e-32
Identities = 67/145 (46%), Positives = 91/145 (62%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
LG IV AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N +L
Sbjct: 293 LGLIVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAF 352
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
GF+ F +GGLTGV++A+ DI +HDTY+VV HFHYVL G+ FA G + +P TG
Sbjct: 353 GFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTG 412
Query: 76 LSLNSYILKIQFFTIFIGVNITXFP 2
+N + ++ F FIG+N+T P
Sbjct: 413 RMVNEPLGRLHFILTFIGMNLTFMP 437
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 136 bits (328), Expect = 3e-31
Identities = 63/147 (42%), Positives = 96/147 (65%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G +GF + HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L
Sbjct: 302 GFIGFGLWVHHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLH 361
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF +F +GGL+GV++A+ D+ HDTY+VVAHFHYVL GAVF +GG YP F
Sbjct: 362 VLGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKF 421
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG ++ + K+ F+ F G N+T FP
Sbjct: 422 TGRMMSERLGKVAFWVTFAGFNLTFFP 448
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 136 bits (328), Expect = 3e-31
Identities = 59/139 (42%), Positives = 97/139 (69%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
++G+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + +
Sbjct: 39 VVGYFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-V 97
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+ F+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS+GAVF + G ++ + +
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCS 157
Query: 79 GLSLNSYILKIQFFTIFIG 23
G +++L++Q + G
Sbjct: 158 GYRSAAWLLRVQVVLLVWG 176
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 134 bits (325), Expect = 6e-31
Identities = 65/146 (44%), Positives = 95/146 (65%), Gaps = 1/146 (0%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPXIL*R 260
LG +V HH+F VG D T +F+S T+II VPTGIK+F L ++ + +P +
Sbjct: 373 LGSVVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWL 432
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+GF+FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS+G+ + + + +P
Sbjct: 433 VGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIV 492
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G SLN Y+L+ + +G N+ FP
Sbjct: 493 GYSLNKYLLQGHWLLSMVGFNLCFFP 518
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 132 bits (320), Expect = 2e-30
Identities = 64/147 (43%), Positives = 92/147 (62%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGF+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N +L
Sbjct: 298 GFLGFLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLY 357
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+ +F +GG++GV LA+ I++ D+YYVVAH HYVL GA+ G +P
Sbjct: 358 AIGFISMFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKM 417
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG L+ + K QF+ + I N+T FP
Sbjct: 418 TGRMLDERLGKWQFWLMLISFNLTFFP 444
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 132 bits (319), Expect = 3e-30
Identities = 66/146 (45%), Positives = 88/146 (60%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGF+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L
Sbjct: 289 GFLGFMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLY 348
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+ F+ F +GG+TGV+LA ++ D HDTY+VVAHFHYV+ G VF + G +P
Sbjct: 349 AVSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKM 408
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXF 5
G L+ + KI F FIG ++T F
Sbjct: 409 FGKILHETMGKISFVLFFIGFHLTFF 434
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 130 bits (314), Expect = 1e-29
Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 2/148 (1%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPXIL* 263
+LG +V HH++T G+++DTRAYFTS TI+I++PTG K+F + T + + L
Sbjct: 287 VLGSLVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLL 346
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
L F+ FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLSIGA+ F
Sbjct: 347 SLLFICTFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNF 406
Query: 82 TGLSL-NSYILKIQFFTIFIGVNITXFP 2
G +L + I+ + F+GV +T P
Sbjct: 407 FGKNLRENSIVILWSMLFFVGVILTFLP 434
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 130 bits (313), Expect = 2e-29
Identities = 63/146 (43%), Positives = 90/146 (61%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+L F+V HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L
Sbjct: 321 VLSFLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWA 380
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
L F+ F +GG+TGV+LA ++ D H+TY++V+HFHYVL G VFA GFI YP
Sbjct: 381 LAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMF 440
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G LN I K F+ IG NI FP
Sbjct: 441 GHKLNERIGKWFFWIFMIGFNICFFP 466
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 129 bits (311), Expect = 3e-29
Identities = 63/147 (42%), Positives = 91/147 (61%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G +GF V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L
Sbjct: 300 GFMGFTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLF 359
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+ FT+GGL+G + A + D HDTY+VVAHFHYVL G++FA + G + +P
Sbjct: 360 AIGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKV 419
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
G L+ + + F IF G + FP
Sbjct: 420 FGRMLDERLGRWSFALIFTGFHTFAFP 446
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 129 bits (311), Expect = 3e-29
Identities = 57/95 (60%), Positives = 76/95 (80%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G LGF V +HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L
Sbjct: 298 GFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLY 357
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 158
+GF+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 358 AVGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 128 bits (309), Expect = 5e-29
Identities = 61/146 (41%), Positives = 91/146 (62%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+LG V AHH+F VG+D+D+RAYF +I+I +PT +K+F + + T + +
Sbjct: 284 ILGMFVWAHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFV 343
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+ F+F+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS+GAV GFI+ +
Sbjct: 344 IMFIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFIHFLAKWL 403
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
+ L + + T+FIG N+ FP
Sbjct: 404 PIELYLFWMFYFISTLFIGSNMLFFP 429
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 128 bits (308), Expect = 7e-29
Identities = 57/92 (61%), Positives = 75/92 (81%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+LGF+V +HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L
Sbjct: 280 GILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLF 339
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYY 167
LGF+ LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 340 ALGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 124 bits (300), Expect = 7e-28
Identities = 61/121 (50%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
Frame = -2
Query: 418 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R-LGFVFL 242
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + L L F+ L
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILL 61
Query: 241 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLNS 62
FT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS+GA+ A I GF+ G +LN
Sbjct: 62 FTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNL 121
Query: 61 Y 59
+
Sbjct: 122 F 122
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 124 bits (299), Expect = 9e-28
Identities = 61/147 (41%), Positives = 91/147 (61%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+L F + HH+F G+ ++FT++++ IAVP G++IF LATI + + L
Sbjct: 296 GVLAFGLWVHHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLF 355
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+ +F +GGLTGV++A+ D +HDTY+VVAHFHYVL GAVF +G +P
Sbjct: 356 VIGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKL 415
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG ++ + + F IF G N+T FP
Sbjct: 416 TGRMMSETLGRWSFGLIFSGFNLTFFP 442
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 124 bits (299), Expect = 9e-28
Identities = 62/143 (43%), Positives = 87/143 (60%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
LLG+ V AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N +
Sbjct: 300 LLGYGVWAHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFA 359
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+ F+ F +GGLTG++ A ID L DTY+VVAHFHYVL G VFA +P T
Sbjct: 360 VAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMT 419
Query: 79 GLSLNSYILKIQFFTIFIGVNIT 11
G LN I +QF+ +G N+T
Sbjct: 420 GRMLNERIGILQFWLWVLGFNMT 442
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 123 bits (297), Expect = 2e-27
Identities = 56/112 (50%), Positives = 83/112 (74%), Gaps = 1/112 (0%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPXIL* 263
L+G +V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N
Sbjct: 265 LIGSVVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFL 324
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGG 107
++ F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V+++ V+ + G
Sbjct: 325 QVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVG 376
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 123 bits (296), Expect = 2e-27
Identities = 63/139 (45%), Positives = 88/139 (63%), Gaps = 3/139 (2%)
Frame = -2
Query: 409 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPXIL*RLGFVFLFT 236
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ +L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 235 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSL-NSY 59
GG TGVIL N +ID+ LHDTYYV+AHFH+VLSIGA+ A F G +L +
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENT 119
Query: 58 ILKIQFFTIFIGVNITXFP 2
I+ + F+GV +T P
Sbjct: 120 IIVLWSILFFVGVVLTFLP 138
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 123 bits (296), Expect = 2e-27
Identities = 56/89 (62%), Positives = 72/89 (80%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
GLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++
Sbjct: 281 GLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMF 340
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHD 176
+ F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 341 AIAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 122 bits (294), Expect = 3e-27
Identities = 62/149 (41%), Positives = 93/149 (62%), Gaps = 2/149 (1%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXI-- 269
G F + HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ +
Sbjct: 306 GFFSFGLWVHHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPS 365
Query: 268 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YP 89
L LGF+F+FTVGG+TGV++A ID +HDTY+VVAHFHYVL G VF F P
Sbjct: 366 LFVLGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIP 425
Query: 88 XFTGLSLNSYILKIQFFTIFIGVNITXFP 2
F+ L+ + + F+ +FIG N+T FP
Sbjct: 426 AFSRNMLSERLGRWVFWLMFIGFNVTFFP 454
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 122 bits (294), Expect = 3e-27
Identities = 58/144 (40%), Positives = 85/144 (59%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
LGFIV HH+F G++ F AT++IA+P+ +K F L T++G ++ + +L L
Sbjct: 331 LGFIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFAL 390
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
FV +F +GGL+G+ +A + +DI +HDTY++VAHFHYVL G A G +P G
Sbjct: 391 SFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFG 450
Query: 76 LSLNSYILKIQFFTIFIGVNITXF 5
+N KI F FI +N T F
Sbjct: 451 RMMNETAGKIHFALTFIFLNGTFF 474
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 119 bits (287), Expect = 2e-26
Identities = 58/145 (40%), Positives = 84/145 (57%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
LGFIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L +
Sbjct: 334 LGFIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCI 393
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
F+ +F VGGL+G+ +A +D+ HDTY++VAHFHY+L +F G +P G
Sbjct: 394 AFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFG 453
Query: 76 LSLNSYILKIQFFTIFIGVNITXFP 2
+N + K F FIG N T FP
Sbjct: 454 RMMNEKLGKTHFVLTFIGANGTFFP 478
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 119 bits (287), Expect = 2e-26
Identities = 56/146 (38%), Positives = 87/146 (59%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+L FIV AHH+F G++ + F T+IIAVP+ +K F + T+ I + P ++
Sbjct: 343 VLSFIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFS 402
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+G V +F GG+TG+IL N+++DI LHDTYYVVAHFH V+ + F + G + +P
Sbjct: 403 IGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMF 462
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G ++ + I F+ F+G + FP
Sbjct: 463 GRMMDEKLGYIHFWFTFVGAYLVFFP 488
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 119 bits (287), Expect = 2e-26
Identities = 59/146 (40%), Positives = 83/146 (56%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+L F V AHH+F G+D RA F + ++ IAVP+ +K F + T+ I +L
Sbjct: 365 GVLSFGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLF 424
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GFV F +GG+TGV LA+ +D+ LH TYYVV HFHY++ FA G +P +
Sbjct: 425 SVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLY 484
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXF 5
TG + K+ F+ IG NIT F
Sbjct: 485 TGRMYQRTLGKMHFWLSMIGTNITFF 510
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 118 bits (285), Expect = 4e-26
Identities = 57/146 (39%), Positives = 85/146 (58%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+LGF V HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I+
Sbjct: 325 VLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWT 384
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
LGF+ F++GG+TGV+LA D LH++ +V+AHFH V+ GAVF I GF +P
Sbjct: 385 LGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAF 444
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G +LN K F+ G + P
Sbjct: 445 GFTLNEKWGKAAFWFWISGFYVAFMP 470
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 117 bits (282), Expect = 1e-25
Identities = 55/147 (37%), Positives = 83/147 (56%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G L F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ I+ +L
Sbjct: 320 GALSFVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLF 379
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+ F GGLTG+ L N +D+ L DT +VVAHFH V+ + + +G + YP
Sbjct: 380 ALGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKV 439
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG LN + K F+ F+G + FP
Sbjct: 440 TGRMLNDVLGKFHFWVTFLGAYLIFFP 466
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 117 bits (281), Expect = 1e-25
Identities = 57/146 (39%), Positives = 86/146 (58%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+LGF+V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL
Sbjct: 326 VLGFMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWT 385
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
LGF+ F++GG+TGV+LA D LH++ +++AHFH + GAVF + G +P
Sbjct: 386 LGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVF 445
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G LN + K F+ IG P
Sbjct: 446 GFKLNDKLGKASFWFWQIGFMFAFMP 471
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 116 bits (279), Expect = 2e-25
Identities = 57/142 (40%), Positives = 83/142 (58%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
LL V HH++ G+ R T++I++P G+ + + T++G I++ +L
Sbjct: 282 LLSGEVWIHHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYA 341
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
LGF+FLF +GGLTGV LA S+ + L +TYYVV HFHYV+++ FA GG +P T
Sbjct: 342 LGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMT 401
Query: 79 GLSLNSYILKIQFFTIFIGVNI 14
G N I K F+ F+GVNI
Sbjct: 402 GKMYNETIGKWAFWITFVGVNI 423
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 116 bits (278), Expect = 3e-25
Identities = 57/144 (39%), Positives = 85/144 (59%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
+ F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L L
Sbjct: 238 VSFFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYAL 297
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
G VF+F +GGLTG+ L +ID+ + D+ +VV HFHYVL + +G I+ +P TG
Sbjct: 298 GGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATG 357
Query: 76 LSLNSYILKIQFFTIFIGVNITXF 5
+ K+ F+ IF G NI F
Sbjct: 358 KYYPENLGKLSFWLIFAGANIFYF 381
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 114 bits (275), Expect = 7e-25
Identities = 55/146 (37%), Positives = 85/146 (58%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+LG +V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ +
Sbjct: 291 VLGTMVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWV 350
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
LGF+F F +GG+TGV+L+ + +D HD+Y+VVAHFH VL G+ F G +P T
Sbjct: 351 LGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMT 410
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G + + ++ F+ +G +T P
Sbjct: 411 GRMYDERLGRLHFWLFLVGYLLTFLP 436
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 113 bits (273), Expect = 1e-24
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPXIL 266
G++G+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F + T G N
Sbjct: 290 GVVGYFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSW 349
Query: 265 *RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPX 86
F+ F GG TG++L++ S+DI LHDTY+VV HFH VLS+ A F + P
Sbjct: 350 SFFSFLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPI 409
Query: 85 FTGLSLNSYILKIQFFTIFIGVNITXFP 2
S+ F + +G + +P
Sbjct: 410 IFSYSIFESFSFYHTFLLLVGALLVFYP 437
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 113 bits (271), Expect = 2e-24
Identities = 57/146 (39%), Positives = 86/146 (58%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
L+GF V HH+F GI A+F +A+++I++P+ + +F +ATI + + L
Sbjct: 317 LIGFEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYF 376
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
GFV +F VGG++GV+ A +D L DTY+VVAH HYVL VF +GG +P FT
Sbjct: 377 AGFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFT 436
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G +N K+ F+ + +G N+ FP
Sbjct: 437 GRMMNERFGKLTFWVVLVGFNLGFFP 462
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 110 bits (265), Expect = 1e-23
Identities = 53/147 (36%), Positives = 81/147 (55%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G L ++V HH+F G++ + F+ T+II +P + L +++G+++ N L
Sbjct: 328 GFLSYVVWGHHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLF 387
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LGF+ +F GG++G LA SIDI LH TY+VV HFH V+ + A+F G +P
Sbjct: 388 ALGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKM 447
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
TG +N + KI F+ FIG P
Sbjct: 448 TGHMMNETLGKIHFWGTFIGAYCIFMP 474
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 110 bits (264), Expect = 2e-23
Identities = 54/144 (37%), Positives = 81/144 (56%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+L F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L
Sbjct: 334 GVLSFGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLF 393
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GFV F +GG+TGV LA ID+ LHDTYYVV HFH+++ FA +P
Sbjct: 394 CIGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMV 453
Query: 82 TGLSLNSYILKIQFFTIFIGVNIT 11
TG + F+T +G N T
Sbjct: 454 TGRMYQKRLAHAHFWTALVGSNAT 477
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 109 bits (263), Expect = 2e-23
Identities = 55/144 (38%), Positives = 87/144 (60%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
L F + AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + L
Sbjct: 324 LSFGLWAHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFIL 383
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
GF+F+F +GG+TGV++A ++ HD+Y+VVAH HYVL G VF G P FTG
Sbjct: 384 GFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTG 443
Query: 76 LSLNSYILKIQFFTIFIGVNITXF 5
++ + K F+ +F G N+ F
Sbjct: 444 RMMSERLGKWVFWLMFSGFNLAFF 467
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 109 bits (263), Expect = 2e-23
Identities = 56/146 (38%), Positives = 80/146 (54%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
L F+V HH+F GI++ + F + TI I++P + +F + T+ ++ + L
Sbjct: 303 LQSFVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFS 362
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
LG + LF +GG+TGV L +D TY+VVAHFHYV+ GA A GG YP T
Sbjct: 363 LGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHYVMVAGAT-ALFGGLYYWYPKIT 421
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G N + KIQF F+G N+ FP
Sbjct: 422 GKMYNETLGKIQFGVYFLGFNLLYFP 447
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 109 bits (261), Expect = 3e-23
Identities = 54/147 (36%), Positives = 86/147 (58%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G L F + HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L
Sbjct: 322 GFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLW 381
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
G + +FT GGLTGV++A + D +HDTY++VAH HY L G VF I G YP
Sbjct: 382 IAGGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVI 441
Query: 82 TGLSLNSYILKIQFFTIFIGVNITXFP 2
T +L+ + + F+ +F G N+T P
Sbjct: 442 TKKALSERLGRWSFWLLFTGFNVTFLP 468
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 107 bits (256), Expect = 1e-22
Identities = 56/145 (38%), Positives = 78/145 (53%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
L IV AHH+F G R F T++IA+PTG+K+F L T+ + N +L +
Sbjct: 308 LSLIVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCI 367
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
G + F G+TGV+LA IDI + +TY+VVAHFHYV+ VF G + +P FTG
Sbjct: 368 GGLINFIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTG 427
Query: 76 LSLNSYILKIQFFTIFIGVNITXFP 2
+ K+ F FIG + P
Sbjct: 428 KMYYEGLGKVHFVLTFIGATLNWLP 452
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 103 bits (247), Expect = 2e-21
Identities = 55/146 (37%), Positives = 78/146 (53%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
L+ IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 299 LVSCIVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWL 358
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+GF+F F +GG+TGV L D + +YYVVAHFH V+ G F + G +P T
Sbjct: 359 IGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMT 418
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G L+ + F+ IG +T P
Sbjct: 419 GRFLDEKVGLAHFWLFMIGSWLTFLP 444
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 102 bits (245), Expect = 3e-21
Identities = 52/144 (36%), Positives = 81/144 (56%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G L V AHH+F G + +F+ T +I+VPTG+K F + T+ I + ++
Sbjct: 305 GALSMAVWAHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIW 362
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
+GF+ F GGLTG++LA+ +D L D+Y+++AHFHY L VFA G +P
Sbjct: 363 SVGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKM 422
Query: 82 TGLSLNSYILKIQFFTIFIGVNIT 11
TG ++ + KI F+ F+G + T
Sbjct: 423 TGRMMDERLGKIHFWLTFVGFHGT 446
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 102 bits (244), Expect = 4e-21
Identities = 48/138 (34%), Positives = 78/138 (56%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
+ F V HH+FT D R AT+ +A+P+G+K+F +AT++G +I +L L
Sbjct: 292 ISFAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFML 351
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
F+ F VGG+TGV ++D+ LHDTY+V+ HFHY+++ F G + +P TG
Sbjct: 352 TFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVN-AIAFGVFGALLYYFPHLTG 410
Query: 76 LSLNSYILKIQFFTIFIG 23
+ + +I + I +G
Sbjct: 411 RWYDERLARISWALITVG 428
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 101 bits (241), Expect = 9e-21
Identities = 55/149 (36%), Positives = 86/149 (57%), Gaps = 4/149 (2%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI---HGT-QINYNPXI 269
L F + HH+FT GI + ++F +A+ +A+P+G+++F +AT T ++
Sbjct: 367 LSFGLWVHHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPT 426
Query: 268 L*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YP 89
L LGF+F+F +GGLTGV++A D HD+Y++VAH HYVL G VF F P
Sbjct: 427 LFILGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMP 486
Query: 88 XFTGLSLNSYILKIQFFTIFIGVNITXFP 2
+ +L+ + + F +F+G NIT FP
Sbjct: 487 YTSRQALSERLGRWVFGLMFVGFNITFFP 515
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 100 bits (240), Expect = 1e-20
Identities = 49/145 (33%), Positives = 83/145 (57%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
L F+V HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L
Sbjct: 346 LSFLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSL 405
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
F+FLF +GG+TG++LAN +D +H+T ++VAHFH ++ G +F + G+ +P G
Sbjct: 406 AFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFG 465
Query: 76 LSLNSYILKIQFFTIFIGVNITXFP 2
L+ +I + G FP
Sbjct: 466 FRLDERWGRISAYCWIFGWMGAFFP 490
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 99.5 bits (237), Expect = 3e-20
Identities = 48/140 (34%), Positives = 85/140 (60%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G + + V HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L
Sbjct: 343 GGISWGVWLHHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLW 402
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
LG +FL VGGLTG++LA +I+ T+H++ +VVAHFH ++ + A +A G I +P
Sbjct: 403 ALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIA-YAIFGAIIFWFPKL 461
Query: 82 TGLSLNSYILKIQFFTIFIG 23
G L++ + F++ +G
Sbjct: 462 FGFHLDAPSARANFWSFSVG 481
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 97.5 bits (232), Expect = 1e-19
Identities = 48/146 (32%), Positives = 80/146 (54%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
++ F+V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L
Sbjct: 289 IISFVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFA 348
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+G + F +GG TGV L + +ID TY+VVAHFHY+L I G +P T
Sbjct: 349 VGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKIT 408
Query: 79 GLSLNSYILKIQFFTIFIGVNITXFP 2
G + + + KI F +GV +T P
Sbjct: 409 GRTYSERLGKIHFALAMLGVALTFLP 434
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 96.7 bits (230), Expect = 2e-19
Identities = 55/115 (47%), Positives = 64/115 (55%)
Frame = -2
Query: 373 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVFLFTVGGLTGVILANSSI 194
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 193 DITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLNSYILKIQFFTIF 29
DI LHDTYYVVAH HYVLS+GAVFA + G + +P FTGL+L I F I+
Sbjct: 282 DIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 96.7 bits (230), Expect = 2e-19
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = -2
Query: 391 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVFLFTVGG 227
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P +L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 95.9 bits (228), Expect = 3e-19
Identities = 52/144 (36%), Positives = 79/144 (54%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL* 263
G+L F + HH+FT GI A+F++A+ ++AVPT +++F + T+ + +L
Sbjct: 296 GVLSFGLWVHHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLW 355
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
L F F +GGLTGV++A D +HDTY++VAH HYVL G VF + P F
Sbjct: 356 LLAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHF 415
Query: 82 TGLSLNSYILKIQFFTIFIGVNIT 11
TG + F+ + IG + T
Sbjct: 416 TGRKTYFNLGPTAFWLVVIGFHGT 439
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 95.5 bits (227), Expect = 5e-19
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 3/149 (2%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+L F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI + +
Sbjct: 320 VLSFLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWF 379
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YP-XF 83
+ F+ +F++GG +GVIL+ ++D H++ +++AHFH V+ G +F + G Y +
Sbjct: 380 ISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIY 439
Query: 82 TGLSLNSYILKIQFFTIF--IGVNITXFP 2
LN+ K F +F IGV +T FP
Sbjct: 440 NNCELNN---KFNFNILFWLIGVILTFFP 465
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 94.7 bits (225), Expect = 8e-19
Identities = 46/54 (85%), Positives = 48/54 (88%)
Frame = -2
Query: 373 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVFLFTVGGLTGVI 212
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 93.5 bits (222), Expect = 2e-18
Identities = 46/142 (32%), Positives = 78/142 (54%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
+L +V HH+F G+ F T++I++P+ + + + T+ + Y+ +L
Sbjct: 319 VLSAMVYGHHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFA 378
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
LG VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++ +V G +P
Sbjct: 379 LGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMF 438
Query: 79 GLSLNSYILKIQFFTIFIGVNI 14
G L + KI F+ F+G+ +
Sbjct: 439 GRRLGERLGKIHFWFTFLGLTL 460
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 91.5 bits (217), Expect = 7e-18
Identities = 44/88 (50%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = -2
Query: 373 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPXIL*RLGFVFLFTVGGLTGVILANSS 197
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 196 IDITLHDTYYVVAHFHYVLSIGAVFAXI 113
ID+ LHDT YVV HFH+VLSIGA+ + I
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAIISMI 396
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 89.8 bits (213), Expect = 2e-17
Identities = 40/124 (32%), Positives = 74/124 (59%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
+G++V HH++ VG+D +R +++ TI+I++P IK+ ++ + + L +
Sbjct: 443 MGYLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSM 502
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS A+ GF + G
Sbjct: 503 SFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFG 562
Query: 76 LSLN 65
+ +
Sbjct: 563 IKFS 566
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 88.6 bits (210), Expect = 5e-17
Identities = 50/144 (34%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPXIL* 263
+L F + HH+FT GI A F++A+ ++AVPT +++F + T+ GT P ++
Sbjct: 297 VLSFGLWVHHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMW 355
Query: 262 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXF 83
L F F +GGLTGV++A D +HDT+++VAH HYVL G VF + P
Sbjct: 356 ILAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHV 415
Query: 82 TGLSLNSYILKIQFFTIFIGVNIT 11
TG + + F+ + +G + T
Sbjct: 416 TGRKRFFRVGDVAFWLVTVGFHAT 439
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 88.6 bits (210), Expect = 5e-17
Identities = 45/145 (31%), Positives = 69/145 (47%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
+GF HH+FT G F ++ + + T IK+F AT++ I +
Sbjct: 301 VGFFTWGHHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFA 360
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
GF+F GG+TG+ LA S+D+ HDTY++VAHFH+++ V A + +P G
Sbjct: 361 GFLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAG 420
Query: 76 LSLNSYILKIQFFTIFIGVNITXFP 2
L + I +G N T P
Sbjct: 421 KRLPEGWGLVAAVMIILGFNFTFIP 445
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 87.4 bits (207), Expect = 1e-16
Identities = 43/145 (29%), Positives = 69/145 (47%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RL 257
+GF HH+F G F T+I+ V T IK+F + T++ + +
Sbjct: 308 VGFFAWGHHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFC 367
Query: 256 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
GF+F GG+TG+ L S+D+ HDTY+VVAHFH+++ + A + +P G
Sbjct: 368 GFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFG 427
Query: 76 LSLNSYILKIQFFTIFIGVNITXFP 2
+ + + I +G N T P
Sbjct: 428 RTYHEGWGLVAAALIILGFNATFIP 452
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 87.0 bits (206), Expect = 2e-16
Identities = 45/145 (31%), Positives = 71/145 (48%)
Frame = -2
Query: 439 LLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*R 260
++GF AHH+F G+ + F T+ + + +F +AT+ +I ++ ++
Sbjct: 283 IVGFSSWAHHMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWS 342
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFT 80
+G + LF G GV+ A +D T HDTY+VV HFH + F IG F +P T
Sbjct: 343 IGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVT 402
Query: 79 GLSLNSYILKIQFFTIFIGVNITXF 5
G N + KI F F+G + F
Sbjct: 403 GRMYNEKLGKIHFVFSFVGAVLLFF 427
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 84.6 bits (200), Expect = 9e-16
Identities = 47/144 (32%), Positives = 70/144 (48%)
Frame = -2
Query: 433 GFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLG 254
G + HH FT D + T T +++PTG + TI G ++ N +L L
Sbjct: 376 GAMSGVHHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLM 434
Query: 253 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGL 74
+ F +GGLTG+ A+ D+ LH+TY+V+AHFH G +F I +P TG
Sbjct: 435 AMMNFLIGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGR 494
Query: 73 SLNSYILKIQFFTIFIGVNITXFP 2
+N + K + F+ N T FP
Sbjct: 495 KINEFWGKFHAWWSFVFFNCTFFP 518
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 84.2 bits (199), Expect = 1e-15
Identities = 42/138 (30%), Positives = 74/138 (53%)
Frame = -2
Query: 424 VXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVF 245
V HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+
Sbjct: 285 VWMHHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIV 344
Query: 244 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLN 65
+F +GG+TGV ID L+ TY+VV HFHY++ ++A +G +P ++G N
Sbjct: 345 MFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV-YAILYALLGALFYYFPFWSGKWYN 403
Query: 64 SYILKIQFFTIFIGVNIT 11
+ K + G +T
Sbjct: 404 DDLGKTGAILLVAGTFLT 421
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 81.8 bits (193), Expect = 6e-15
Identities = 48/142 (33%), Positives = 72/142 (50%)
Frame = -2
Query: 427 IVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFV 248
+V HH F GI + T I++PT + I +AT+ G + + IL L
Sbjct: 314 MVFLHHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAAS 373
Query: 247 FLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSL 68
F +GG++GV ++ +ID +H YYVVAHFHY + AV +G +P FTG
Sbjct: 374 TSFMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMY 433
Query: 67 NSYILKIQFFTIFIGVNITXFP 2
+ + +I + + GVNI FP
Sbjct: 434 SEKLGRIHWAFAYPGVNILYFP 455
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 72.9 bits (171), Expect = 3e-12
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 320
GLLGF+V +HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF
Sbjct: 281 GLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAIPTGIKIF 321
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 64.5 bits (150), Expect = 1e-09
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL- 266
G +V HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+
Sbjct: 21 GAYSNVVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVW 80
Query: 265 *RLGFVFLFTVGGLTG 218
+GF+FLFT+GG G
Sbjct: 81 WIIGFIFLFTMGGRQG 96
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 59.3 bits (137), Expect = 4e-08
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL 266
+G V HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 46 MGSSVWGHHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 56.0 bits (129), Expect = 3e-07
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = -2
Query: 436 LGFIVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 296
LG +V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 47 LGSVVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 55.6 bits (128), Expect = 5e-07
Identities = 30/98 (30%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = -2
Query: 427 IVXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INY-NPXIL*RLG 254
++ HH+ T + +D RA+ T +T+++A +G+ + TI ++ +Y +P + L
Sbjct: 50 LIWVHHLQTFPLPVDLRAWITVSTLVLASGSGLTVLNLGLTILTSKGYDYKDPLGMTFLI 109
Query: 253 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 140
+ F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 110 ALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = -2
Query: 409 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 320
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 52.8 bits (121), Expect = 3e-06
Identities = 36/107 (33%), Positives = 45/107 (42%)
Frame = -1
Query: 323 F*MISYNTWNSN*L*PXYFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXX 144
F M Y +W++N L P + FC FI+ N +FSQF Y
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLR 83
Query: 143 XXXXXXICXYWGIY*LISXIYRPXIKFLYTKNSIFYNIYWSKYNXFS 3
IC Y IY L+ + K KNSI+ NIY SK N FS
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFS 130
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 1e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -2
Query: 388 IDTRAYFTSATIIIAVPTGIKIFR*LAT 305
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
Score = 46.0 bits (104), Expect = 4e-04
Identities = 33/100 (33%), Positives = 37/100 (37%)
Frame = -1
Query: 302 TWNSN*L*PXYFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXXXXXXXXI 123
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 122 CXYWGIY*LISXIYRPXIKFLYTKNSIFYNIYWSKYNXFS 3
C Y GIY L+ I K L KNSIFYNI+ K FS
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFS 130
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 50.0 bits (114), Expect = 2e-05
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Frame = -2
Query: 424 VXAHHIFT---VGIDID-TRAYFTSATIIIAVPTGIKIFR*LATIH------GTQINY-- 281
+ HH+FT VG ++ FTS ++AVPT + IF A++ G + +
Sbjct: 261 IGIHHLFTDPQVGAGFKFLQSVFTS---LVAVPTLLTIFTICASVEIAARLRGGKGTFGW 317
Query: 280 -------NPXIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAV 125
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + + V
Sbjct: 318 LAALPWDNPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIV 376
Query: 124 FAXIGGFIN*YPXFTGLSLNSY-ILKIQFFTIFIGVNITXFP 2
+ +P TG +L +++ Q + FIG+ +T FP
Sbjct: 377 TMYFAIAYDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTTFP 418
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 47.2 bits (107), Expect = 2e-04
Identities = 40/102 (39%), Positives = 43/102 (42%)
Frame = -3
Query: 327 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED*QV*F*PXXXXXXXXXXXXXXXXXXX 148
KFL D +MELKLI+ L FYED L FY Q ED F
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSEDSLELFSLIHPLMLLYMMHIMLSHISI 375
Query: 147 XXYQ*EQYLQXLGDLLTDILYLQAXH*ILIY*KFNFLQYLLE 22
+ QYL DL D LYL I Y KFNFL Y E
Sbjct: 376 MFFPSGQYLLLSADLFIDTLYLLDYLSIHSYSKFNFLLYSSE 417
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 46.4 bits (105), Expect = 3e-04
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = -2
Query: 424 VXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGFVF 245
V HH++ V + I + T + +P+ + F AT G + +N +
Sbjct: 294 VPIHHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFA 353
Query: 244 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAV 125
G+TG+ A S D +H+T +VV HFH ++ V
Sbjct: 354 GAIAAGVTGISNATISFDAIVHNTDWVVGHFHAMILFSIV 393
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 46.0 bits (104), Expect = 4e-04
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = -2
Query: 424 VXAHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PXIL*RLG 254
V HH+ T + I R + +T+I+A +G+ + TI T Y+ P + L
Sbjct: 281 VWVHHLQTWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALI 339
Query: 253 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 140
+ F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 340 SLIGFILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 44.8 bits (101), Expect = 8e-04
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Frame = -2
Query: 376 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPXIL*RLGFVFLFT-VGGLT 221
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 220 GVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIG 110
GV++ +++T H+T+ V HFH +++G A +G
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFHGTVALGTTLAFMG 412
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 44.4 bits (100), Expect = 0.001
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 2/137 (1%)
Frame = -2
Query: 427 IVXAHHIFTVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPXIL*RLGF 251
+V HH++ + + +T+ I++ + + +F LA + + I P + L
Sbjct: 309 LVWVHHLYLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIA 368
Query: 250 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YP-XFTGL 74
+F + G +GV A + ++ LH+T +VVAHFH + + I P + +
Sbjct: 369 MFAWLEAGYSGVAQAIVAWNLYLHNTLWVVAHFHTMALLNIAMVAIALIYYLVPKAYPWV 428
Query: 73 SLNSYILKIQFFTIFIG 23
+L K+ F+ +G
Sbjct: 429 NLYDKWSKVHFWMTLVG 445
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 44.0 bits (99), Expect = 0.001
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = -2
Query: 250 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLS 71
+ LF GG G+I A+ +I++ +H+T ++ HFH + + +G P TG
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRR 418
Query: 70 LNSYILK-IQFFTIFIGVNI 14
L S + +Q +T F+G+ I
Sbjct: 419 LWSPTMALVQAWTWFVGMGI 438
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 44.0 bits (99), Expect = 0.001
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +3
Query: 294 VPCIVANHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AXTMNPN 437
VP + NH K LIPVGT +I+V E+K V S PTVN+ A T P+
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQTTLPS 98
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 41.9 bits (94), Expect = 0.006
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = -2
Query: 280 NPXIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFI 101
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + + + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAY 386
Query: 100 N*YPXFTGLSLNSYILK-IQFFTIFIGVNITXFP 2
+P G L S L +Q + FIG+ I P
Sbjct: 387 KLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTP 420
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.008
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = -2
Query: 244 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 149
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 39.9 bits (89), Expect = 0.024
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 259 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFA 119
L + +GG++GV + I+I +H+T YV HFH ++ G A
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFHATVAAGTTLA 397
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.032
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -2
Query: 250 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 149
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 39.5 bits (88), Expect = 0.032
Identities = 15/46 (32%), Positives = 27/46 (58%)
Frame = -2
Query: 250 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXI 113
+ LF + G +GV+ A+ +++ +H+T +VV HFH + G I
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGGVTLTFI 385
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 38.3 bits (85), Expect = 0.074
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = -2
Query: 280 NPXIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFI 101
+P + +L + F GG+TG+I A+ +++ +H+T +V HFH + +G
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFHMTVGSAVAMTFMGVAY 405
Query: 100 N*YPXFTGLSL 68
P TG L
Sbjct: 406 WMVPYLTGKKL 416
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 37.9 bits (84), Expect = 0.097
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = -2
Query: 217 VILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIG 110
+ L+ D T HDTYYVVAH HY+ + + +G
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYLGLLALLVVAVG 64
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 36.7 bits (81), Expect = 0.22
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -2
Query: 244 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTGLSLN 65
+F GG +G++ A +I+ +H+T +V HFH + + +P T +
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFHLTVGTAVALTFMAATYWIWPQITNKPIY 417
Query: 64 SYILKI-QFFTIFIGV 20
S + + Q FIG+
Sbjct: 418 SRSIGLFQVVLWFIGM 433
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 35.9 bits (79), Expect = 0.39
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -2
Query: 250 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFA 119
+ F GG+ G+I A+ ++ +H+T +VV HFH +++GA A
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH--ITVGAPVA 394
>UniRef50_Q5KZD0 Cluster: Cytochrome c oxidase (B(O/a)3-type) chain
I; n=2; Geobacillus|Rep: Cytochrome c oxidase
(B(O/a)3-type) chain I - Geobacillus kaustophilus
Length = 387
Score = 35.9 bits (79), Expect = 0.39
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -2
Query: 253 FVFLFTVGGLTGVI--LANSSIDIT--LHDTYYVVAHFHYVLSIGAVFAXIG 110
F+FL G + GV+ +A+++I I +H+T +V HFH + IGAV G
Sbjct: 238 FIFLSMFGWVAGVMPAIADATIVINHVMHNTKWVPGHFHMYMGIGAVSMLFG 289
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 35.9 bits (79), Expect = 0.39
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -2
Query: 442 GLLGFIVXAHHIFTVGIDIDTR 377
G LGF V +HH+FTVG+D D R
Sbjct: 298 GFLGFCVWSHHMFTVGLDADKR 319
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 35.5 bits (78), Expect = 0.52
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 241 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFIN*YPXFTG 77
F GG G++ A+ ++D +H+T +V HFH ++ +G P TG
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTG 75
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 34.7 bits (76), Expect = 0.91
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -2
Query: 244 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFA 119
+F +G++ A +I+ +H+T++VV HFH L++G A
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH--LTVGTAVA 389
>UniRef50_A5FDI9 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium johnsoniae UW101|Rep: Putative
uncharacterized protein - Flavobacterium johnsoniae
UW101
Length = 159
Score = 33.9 bits (74), Expect = 1.6
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 205 NSSIDITLHDTYYVVAHFHYV--LSIGAVFAXIGGFI 101
+++ DI +HDTY+V+ HF+ LS+G +G +I
Sbjct: 36 DNTFDINVHDTYFVIGHFYVALFLSLGYYLTGLGYWI 72
>UniRef50_A4ZGV2 Cluster: FoxA; n=4; Sulfolobaceae|Rep: FoxA -
Sulfolobus metallicus
Length = 595
Score = 33.9 bits (74), Expect = 1.6
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = -2
Query: 259 LGFVFLFTVGGLTGVILANS-----SIDITLHDTYYVVAHFHYVLSIGAVFAXIG 110
L F+F V + G I A S+D T+H+T ++ +HFH +L++ +V +G
Sbjct: 357 LAFIFAAAVWNIIGGIQAEPTQPTPSVDPTVHNTLWLPSHFHIMLALYSVGGLLG 411
>UniRef50_A3ESP7 Cluster: Cbb3-type cytochrome oxidase, subunit 1;
n=3; Bacteria|Rep: Cbb3-type cytochrome oxidase, subunit
1 - Leptospirillum sp. Group II UBA
Length = 479
Score = 32.7 bits (71), Expect = 3.7
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Frame = -2
Query: 418 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ---INYNPXIL*RLGFV 248
AHH+ I +++ + + ++I VP+ + L T++G + P G +
Sbjct: 267 AHHLMGAPIPEWLKSFASVSGVLILVPSMAFLANALLTMYGKWRLFVEVPPLRWVATGTL 326
Query: 247 FLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGG 107
F + G +I+ +H T++VVAH H + + F IGG
Sbjct: 327 FAIPLN-FQGGFQQTRAINWYIHGTHWVVAHAHLGILGFSTFVEIGG 372
>UniRef50_UPI00015BC923 Cluster: UPI00015BC923 related cluster; n=1;
unknown|Rep: UPI00015BC923 UniRef100 entry - unknown
Length = 748
Score = 32.3 bits (70), Expect = 4.8
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = -2
Query: 229 GLTGVILANSSIDITLHDTYYVVAHFHYVL--SIGAVFAXIGGFIN*Y-PXFTGLSLNSY 59
G G+ + +++ H TY+V+AH H L + G + FI Y G +
Sbjct: 601 GFYGMFINEPAVNYFTHGTYFVMAHSHVALLGAFGYIAIAFIYFILEYRAAAEGFVWDMK 660
Query: 58 ILKIQFFTIFIGVNITXFP 2
+ K+ F+ I IG+ + P
Sbjct: 661 LSKLAFWLITIGICLYTIP 679
>UniRef50_Q1H1D5 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylobacillus flagellatus KT|Rep: Cytochrome c
oxidase, subunit I - Methylobacillus flagellatus (strain
KT / ATCC 51484 / DSM 6875)
Length = 494
Score = 31.9 bits (69), Expect = 6.4
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = -2
Query: 415 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT--QINYNPXIL*RLGFVFL 242
HH+ + A +A+I++ +P T+ G + Y+P + +
Sbjct: 273 HHLIGGPLPSWMIATSITASIMMVIPVVAVGINHHMTVVGRFGAMRYSPALTLAVIAAMS 332
Query: 241 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGG 107
+T L G++ A S++ H T++ +AH H L + + GG
Sbjct: 333 YTAVSLQGILTALVSVNRITHFTHWTIAHSHLGLYMFVTLSLFGG 377
>UniRef50_Q73P94 Cluster: Membrane protein, putative; n=1; Treponema
denticola|Rep: Membrane protein, putative - Treponema
denticola
Length = 238
Score = 31.5 bits (68), Expect = 8.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 235 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIG 110
+ GL GV+L + + L Y V+ H H+ + AVF+ IG
Sbjct: 46 ITGLYGVLLCYTVLFAVLFFYYQVILHLHFPMFQSAVFSVIG 87
>UniRef50_A5DV48 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 304
Score = 31.5 bits (68), Expect = 8.5
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 259 LGFVF--LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSIGAVFAXIGGFI 101
L F+F L VGG+TG++L S+ ++T ++V + +S+G V I +
Sbjct: 50 LAFIFNVLKIVGGITGLVLLKST---NFNETLFIVTYIFDSISLGLVLRAISSLV 101
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,893,892
Number of Sequences: 1657284
Number of extensions: 3387969
Number of successful extensions: 7311
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 7191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7284
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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