Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_F23
         (443 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    25   0.24 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.3  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   2.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   9.2  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    20   9.2  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 266 MKIRFCIFIHSRRINRCNFSQF 201
           M  R CI I S R N  NFS+F
Sbjct: 1   MSTRICIPISSGRTNGSNFSKF 22


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 300 CIVANHLKILIPVGTAIIIVAEVK 371
           CI+ N L+ILI V    + + E K
Sbjct: 285 CILTNTLEILITVTVCELTILEYK 308


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 300 CIVANHLKILIPVGTAIIIVAEVK 371
           CI+ N L+ILI V    + + E K
Sbjct: 110 CILTNTLEILITVTVCELTILEYK 133


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 163 VAHFHYVLSIGAVFAXIGGFIN*YPXFTGLS 71
           +A F   +++GA +  +  F   YP + G S
Sbjct: 187 LAAFKRTIALGAFYQPLQPFPPPYPFYPGTS 217


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 106 FIN*YPXFTGLSLNSYILKI 47
           F+  YP F  L +++ +LKI
Sbjct: 154 FVEVYPLFVLLIVSNVVLKI 173


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,280
Number of Sequences: 336
Number of extensions: 971
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)