Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_F22
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    26   0.24 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.3  
Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      23   2.3  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   3.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   3.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   3.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.9  

>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 25.8 bits (54), Expect = 0.24
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 101 GSGRTVRHILGGRARKIFGVVRHPLVVG 184
           G GR +  I GGR +    V   PLV+G
Sbjct: 8   GQGRRIGIISGGRGQNTQRVQNQPLVIG 35


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 163 PPSTCSGDDSDPDAEANRFCS 225
           P   C+GD+  PD   N  C+
Sbjct: 549 PDQFCNGDNRPPDCGQNCMCT 569


>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 392 GRCKGRCSSWR 360
           GRC+G+ S WR
Sbjct: 9   GRCEGKDSKWR 19


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 364 GEDKYGNKYYENPRFF 317
           G +K+ +K +EN RFF
Sbjct: 422 GLEKHVDKVFENARFF 437


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 23   VFYKXNFSVNLFLN 64
            VFY  NFS+N +++
Sbjct: 1615 VFYNANFSINYWIS 1628


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = -1

Query: 200 SGSESSPLQVDGGPHRKSFWHDRPICAVQYDPTQSGSLGAETQRQC 63
           SG+ES     DG   ++    D   C+V Y     GS     QR+C
Sbjct: 435 SGNES-----DGVCTKEGIVRDPSDCSVYYTCVSDGSKLVSIQRKC 475


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 205 PHQDPSRPHYKWM 167
           P   P  P YKWM
Sbjct: 188 PQPQPVLPTYKWM 200


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 196 PDAEANRFCSVANQTIQREPDFHHSS 273
           PD   N   S   + I+ +PDFH S+
Sbjct: 16  PDESIN--ISDVIEVIETDPDFHEST 39


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 205 PHQDPSRPHYKWM 167
           P   P  P YKWM
Sbjct: 188 PQPQPVLPTYKWM 200


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -2

Query: 205 PHQDPSRPHYKWM 167
           P   P  P YKWM
Sbjct: 188 PQPQPVLPTYKWM 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,542
Number of Sequences: 336
Number of extensions: 3610
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)