Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_F21
         (634 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q54BH5 Cluster: Putative uncharacterized protein; n=1; ...    35   1.4  
UniRef50_Q8IJE4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_P32568 Cluster: Protein SNQ2; n=9; Saccharomycetales|Re...    33   5.7  
UniRef50_A0CTJ3 Cluster: Chromosome undetermined scaffold_27, wh...    33   7.5  
UniRef50_O61932 Cluster: Putative uncharacterized protein; n=2; ...    32   10.0 

>UniRef50_Q54BH5 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 748

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -1

Query: 595 IWKPVCFSIPYETSRKLVYRLIVSHYCDRINTFVTKYCMICR 470
           +W P C S PYETSR   +  I+     RIN    K   +C+
Sbjct: 637 LWDPSCISSPYETSRYHSFESILKFLKSRINVPKRKVLHVCQ 678


>UniRef50_Q8IJE4 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 303

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +3

Query: 330 LQMYINLYIYMFLLI*IEFHEQCKHSTTIVCNNIKNTKQV 449
           + ++ N+YIY+++ I + F   CK S  I+ N+IK  ++V
Sbjct: 32  ISVHQNIYIYIYIYIYLLFFSFCKPSRAILENDIKQLEEV 71


>UniRef50_P32568 Cluster: Protein SNQ2; n=9; Saccharomycetales|Rep:
           Protein SNQ2 - Saccharomyces cerevisiae (Baker's yeast)
          Length = 1501

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 595 IWKPVCFSIPYETSRKLVYRLIVSHYC 515
           IWK VCF+IPYE  ++++    VS YC
Sbjct: 854 IWKDVCFTIPYEGGKRMLLD-NVSGYC 879


>UniRef50_A0CTJ3 Cluster: Chromosome undetermined scaffold_27, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_27,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 283

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 15/63 (23%), Positives = 35/63 (55%)
 Frame = -3

Query: 326 MLSKCICLR*FLMQQYAVNIIIFNYQSLFC*KKFYYLITFN*NVLISINAYNKYFCSLTN 147
           +L+K + L  F ++ +A+ ++++++      + FYYL      +++ I   N+YF + T 
Sbjct: 128 LLNKLLVLAFFFIELFALIMLLYSHSIFIVDRLFYYLCIVY-MIIVVIFGLNQYFSTFTK 186

Query: 146 ILL 138
           + L
Sbjct: 187 VFL 189


>UniRef50_O61932 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 414

 Score = 32.3 bits (70), Expect = 10.0
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 470 TTNHTIFSYKSIDAIAVVTHYQSIYQF 550
           TTNH I   KS+D  A + H++S+ QF
Sbjct: 44  TTNHRIDMNKSLDITAAIHHFESVSQF 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,529,518
Number of Sequences: 1657284
Number of extensions: 8704259
Number of successful extensions: 21357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21294
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)