Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_F20
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X89601-1|CAA61760.1|  665|Drosophila melanogaster CNG channel pr...    29   6.8  
AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-P...    29   6.8  
AE013599-2229|AAF58033.1|  665|Drosophila melanogaster CG7779-PA...    29   6.8  

>X89601-1|CAA61760.1|  665|Drosophila melanogaster CNG channel
           protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 474 MYFLHGYQVSSQSDAWFSSYNGTSVKT 394
           MYF   Y++   SD+W  + NGT   T
Sbjct: 268 MYFAISYEIGFSSDSWVYNLNGTRNNT 294


>AE014297-1451|AAF54749.1| 1718|Drosophila melanogaster CG14741-PA
            protein.
          Length = 1718

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
 Frame = -3

Query: 471  YFLHGYQVSSQSDAWFSSYNGTSVKTTVDLHISTDINLYY*E*LCRL*LGLVFITTSKRT 292
            YF +     +    W+S + G S +T  D    +  NL+Y   L  L LG+     S + 
Sbjct: 1350 YFFYKNFAFTLCHCWYSLFCGFSAQTVFDPMFISVYNLFYTS-LPVLALGVFEQDVSDKN 1408

Query: 291  YARLMQKTVPGI-DRIYRLENFVYTRLSTFF 202
                 +   PG+   ++ +  F+Y+ L   F
Sbjct: 1409 SLEFPRLYTPGLKSELFNIREFIYSVLHGAF 1439


>AE013599-2229|AAF58033.1|  665|Drosophila melanogaster CG7779-PA
           protein.
          Length = 665

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 474 MYFLHGYQVSSQSDAWFSSYNGTSVKT 394
           MYF   Y++   SD+W  + NGT   T
Sbjct: 268 MYFAISYEIGFSSDSWVYNLNGTRNNT 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,680,985
Number of Sequences: 53049
Number of extensions: 475919
Number of successful extensions: 762
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)