Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_F20
         (626 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z75532-3|CAA99810.1|  660|Caenorhabditis elegans Hypothetical pr...    28   4.8  
Z81500-8|CAM84816.1|  284|Caenorhabditis elegans Hypothetical pr...    27   8.3  

>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
           protein H05G16.1 protein.
          Length = 1111

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 92  IQRLMFVQGHLKIRSNSDLYKYLKESVTNSYLFTQKQKN 208
           I++L F +  L ++ + D Y+YLKE+V  S+    + KN
Sbjct: 275 IRKLSFKRKKLLVKLHPDSYQYLKETVEFSFETRDECKN 313


>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical protein
            ZK337.1c protein.
          Length = 1516

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 531  VIIIRESDTHINISLSIKYMYFLHGYQVSSQSDAWFSSYNGTSV 400
            V I+    TH +  ++I+    L  YQ+SS +DA   + NGT V
Sbjct: 1282 VTILNGKHTH-SFDINIRNAIVLQSYQLSSLNDAVSINANGTGV 1324


>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical protein
            ZK337.1b protein.
          Length = 1501

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 531  VIIIRESDTHINISLSIKYMYFLHGYQVSSQSDAWFSSYNGTSV 400
            V I+    TH +  ++I+    L  YQ+SS +DA   + NGT V
Sbjct: 1285 VTILNGKHTH-SFDINIRNAIVLQSYQLSSLNDAVSINANGTGV 1327


>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical protein
            ZK337.1a protein.
          Length = 1508

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 531  VIIIRESDTHINISLSIKYMYFLHGYQVSSQSDAWFSSYNGTSV 400
            V I+    TH +  ++I+    L  YQ+SS +DA   + NGT V
Sbjct: 1274 VTILNGKHTH-SFDINIRNAIVLQSYQLSSLNDAVSINANGTGV 1316


>Z75532-3|CAA99810.1|  660|Caenorhabditis elegans Hypothetical
           protein C54G10.3 protein.
          Length = 660

 Score = 28.3 bits (60), Expect = 4.8
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 107 FVQGHLKIRSNSDLYKYLKESVTNSYLFTQKQKNVL 214
           F Q H+++RSN +   + +  V  + +  QK KN++
Sbjct: 214 FRQRHMEVRSNVEAIAFYRAGVLENIMTNQKLKNLI 249


>Z81500-8|CAM84816.1|  284|Caenorhabditis elegans Hypothetical
           protein F11D11.14 protein.
          Length = 284

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
 Frame = +2

Query: 143 DLYKYLKESVTNSYLFTQKQK-NVLSLVYTKFS-SRYIRSIPGTVFCIK 283
           D YK L  ++T+ Y +T K   +  S V  +    R+ R I GTV C+K
Sbjct: 101 DSYKKLTFAITSGYTWTWKTDGDEYSFVGCRDGWKRFEREIDGTVVCMK 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,253,349
Number of Sequences: 27780
Number of extensions: 269722
Number of successful extensions: 507
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 507
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)