Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_F14
         (659 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   0.96 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.7  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   3.9  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.1  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   6.8  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.8  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 311 LQIHKQFLYAIMVHKT*SNIKSR 243
           ++I+ QFLY  M++     IKS+
Sbjct: 134 IEIYSQFLYGFMIYLILDTIKSK 156


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -3

Query: 519 DPNVRYEALLAVQKLMVHNWEYL 451
           DP   Y  LL   ++  H W+Y+
Sbjct: 69  DPKAMYTVLLEFVQIDPHRWKYV 91


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 532 PESRRSECTLRSLARRAETYGSQLGISW 449
           PES  SE  +R L R    Y  +   SW
Sbjct: 292 PESNPSERVMRELGRIFRAYCRENHASW 319


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 343 FVAIVTLIECCYKFINNSYMLLWFIKL 263
           FVA   +++  +K INN    LW  KL
Sbjct: 190 FVAANVILKTRFKTINNILENLWAKKL 216


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 642 PVVLAVACYDIGEYVRHYPRGKHIIE 565
           PV+L  +     EY+ + P  K+II+
Sbjct: 419 PVILWTSTLTQKEYLENLPSDKYIIQ 444


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 163 YYCVYYMYKNCV 128
           + C YY  KNCV
Sbjct: 231 FSCQYYQGKNCV 242


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -2

Query: 163 YYCVYYMYKNCV 128
           + C YY  KNCV
Sbjct: 251 FSCQYYQGKNCV 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,450
Number of Sequences: 336
Number of extensions: 3552
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)