Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F14
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 120 1e-27
U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical p... 102 2e-22
Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 28 5.1
U88184-3|AAK31519.1| 648|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 28 6.8
AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 27 8.9
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 27 8.9
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 120 bits (288), Expect = 1e-27
Identities = 53/76 (69%), Positives = 62/76 (81%)
Frame = -3
Query: 657 EKXRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQK 478
E DP++L VA +DIGEYVRHYPRGK ++EQ GK VM LL+ +DPNVRY ALLAVQK
Sbjct: 386 ESSHDPLILCVASHDIGEYVRHYPRGKTVVEQYQGKAAVMRLLTAEDPNVRYHALLAVQK 445
Query: 477 LMVHNWEYLGKQLEKE 430
LMVHNWEYLGKQL+ +
Sbjct: 446 LMVHNWEYLGKQLDSD 461
>U41109-12|AAB37043.1| 451|Caenorhabditis elegans Hypothetical
protein F52E1.10 protein.
Length = 451
Score = 102 bits (245), Expect = 2e-22
Identities = 46/73 (63%), Positives = 59/73 (80%)
Frame = -3
Query: 657 EKXRDPVVLAVACYDIGEYVRHYPRGKHIIEQLGGKQRVMYLLSHDDPNVRYEALLAVQK 478
EK DP+VL VA +DIGE+VR+YPRGK +EQLGGK+ +M LL+ DPNVRY ALLA QK
Sbjct: 379 EKSNDPLVLCVAAHDIGEFVRYYPRGKLKVEQLGGKEAMMRLLTVKDPNVRYHALLAAQK 438
Query: 477 LMVHNWEYLGKQL 439
LM++NW+ LG ++
Sbjct: 439 LMINNWKDLGLEI 451
>Z81573-1|CAB04625.3| 909|Caenorhabditis elegans Hypothetical
protein M02G9.1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 372 CHKKIMP*LQPQCQ---PVCRFVPSPVACQDIPSCEP 473
C MP QP C P+ P PV Q IP C+P
Sbjct: 372 CVPSCMPACQPSCTNPVPLTTQAPVPVVNQCIPPCQP 408
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 399 QPQCQPVCR---FVPSPVACQDIPSCE 470
QP C P C P+PV Q +P C+
Sbjct: 129 QPSCMPACEQSCVAPAPVTVQCVPQCQ 155
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 399 QPQCQPVCR---FVPSPVACQDIPSCE 470
QP C P C P+PV Q +P C+
Sbjct: 130 QPSCMPACEQSCVAPAPVTVQCVPQCQ 156
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 563 CSMMCLPRG*WRTYSPMS*QATASTTGS 646
CS + +P G TYSP S T+ T+G+
Sbjct: 1055 CSALTIPSGAQATYSPFSLSTTSFTSGT 1082
>U88184-3|AAK31519.1| 648|Caenorhabditis elegans Hypothetical
protein F36H5.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +3
Query: 219 IDVFLIKQSTFYV*LSFMNHNSI*ELFMNL*QHSINVTIATNYIFF*FTML 371
+DV L+ Q+T Y + +NH + E N + S+N +A+N F FT L
Sbjct: 492 LDVELV-QTTDYQRMVVLNHTKLVETRTNRVKFSLNDLLASNASFLQFTNL 541
>AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 6 protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 329 NNSNKLYIFLIYNVMS*KNYALAPTTVPACLSICSFSSCLPRYSQ 463
N + ++ YN + +N AP PAC + C+ P Y Q
Sbjct: 247 NQNTNTQMYNPYNTNTSQNANCAPACQPACDNSCTSQQTQPMYQQ 291
>AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 7 protein.
Length = 438
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +2
Query: 329 NNSNKLYIFLIYNVMS*KNYALAPTTVPACLSICSFSSCLPRYSQ 463
N + ++ YN + +N AP PAC + C+ P Y Q
Sbjct: 247 NQNTNTQMYNPYNTNTNQNANCAPACQPACDNSCTSQQAQPVYQQ 291
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 399 QPQCQPVCRFVPSPVACQDIPSCEP 473
Q CQ + P+PV CQ PSC P
Sbjct: 112 QQSCQASSCYTPAPVQCQ--PSCMP 134
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,816,740
Number of Sequences: 27780
Number of extensions: 302591
Number of successful extensions: 750
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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