Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F13
(572 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 199 1e-51
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 179 1e-45
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 81 5e-16
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 81 6e-16
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 79 3e-15
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 78 4e-15
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 78 4e-15
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 78 6e-15
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 77 8e-15
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 77 8e-15
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 73 1e-13
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 63 1e-10
12_02_1282 + 27528159-27529148,27529549-27529614 59 2e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 50 2e-06
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 43 2e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 42 3e-04
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 33 0.16
04_04_0676 - 27187778-27188316,27188441-27188530,27189249-271894... 33 0.16
03_05_0725 + 27155736-27155746,27155798-27155949,27156108-271580... 29 2.6
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 27 8.0
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 199 bits (486), Expect = 1e-51
Identities = 93/138 (67%), Positives = 106/138 (76%)
Frame = -1
Query: 572 LGPEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQ 393
LGPEIFFHPE N DFT PL+ ++D+ IQS PID RR LY NIVLSGGSTMF+DF RRLQ
Sbjct: 332 LGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQ 391
Query: 392 RDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHT 213
RD+K+ VDAR+ S G +PI+V VVSH +QRYAVWFGGS+LAST EFY+ CHT
Sbjct: 392 RDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHT 451
Query: 212 KQAYMEYGPSICRHNPVF 159
K Y EYG SICR NPVF
Sbjct: 452 KAEYEEYGASICRTNPVF 469
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 179 bits (436), Expect = 1e-45
Identities = 81/138 (58%), Positives = 102/138 (73%)
Frame = -1
Query: 572 LGPEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQ 393
LGPEIFFHPE +ADF+ PL E++D +QS PID RR LY NIVLSGGSTMF+DF +RLQ
Sbjct: 301 LGPEIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQ 360
Query: 392 RDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHT 213
DIK+ VD R+ + + + KP++V VV+H +Q YA WFGGS+ AS PEFY+ CHT
Sbjct: 361 NDIKKIVDERVAATN--ARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHT 418
Query: 212 KQAYMEYGPSICRHNPVF 159
K+ Y E+G SICR + VF
Sbjct: 419 KEEYEEHGASICRTSTVF 436
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 81.4 bits (192), Expect = 5e-16
Identities = 46/129 (35%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P F + ++E I C +D+R+ LYGN+VLSGGSTMF G R+ ++
Sbjct: 259 PEVLFQPSFIGME-APGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ +K
Sbjct: 318 IT----------------ALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 361
Query: 206 AYMEYGPSI 180
Y E GP I
Sbjct: 362 EYDESGPGI 370
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 81.0 bits (191), Expect = 6e-16
Identities = 46/129 (35%), Positives = 67/129 (51%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P F + ++E I C +D+R+ LYGNIVLSGG+TMF R+ ++
Sbjct: 260 PEVLFQPSFIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKE 318
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ K
Sbjct: 319 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 363 EYDESGPSI 371
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/129 (34%), Positives = 67/129 (51%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P + ++E I C +D+R+ LYGN+VLSGGSTMF R+ ++
Sbjct: 263 PEVLFQPSLVGME-AAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKE 321
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ +K
Sbjct: 322 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 365
Query: 206 AYMEYGPSI 180
Y E GP+I
Sbjct: 366 EYDESGPAI 374
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 78.2 bits (184), Expect = 4e-15
Identities = 44/129 (34%), Positives = 67/129 (51%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P + ++E I C +D+R+ LYGNIVLSGG+TMF R+ ++
Sbjct: 260 PEVLFQPSMIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKE 318
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ +K
Sbjct: 319 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKD 362
Query: 206 AYMEYGPSI 180
Y E GP+I
Sbjct: 363 EYDESGPAI 371
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 78.2 bits (184), Expect = 4e-15
Identities = 43/129 (33%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P + + ++E I C +D+R+ LYGN+VLSGG+TMF R+ ++
Sbjct: 260 PEVLFQPSMIGME-SAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKE 318
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ +K
Sbjct: 319 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKD 362
Query: 206 AYMEYGPSI 180
Y E GP+I
Sbjct: 363 EYDESGPAI 371
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 77.8 bits (183), Expect = 6e-15
Identities = 45/129 (34%), Positives = 67/129 (51%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P + ++E I C +D+R+ LYGNIVLSGG+TMF R+ ++
Sbjct: 257 PEVLFQPSLIGME-APGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKE 315
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ +K
Sbjct: 316 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKG 359
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 360 EYDESGPSI 368
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 77.4 bits (182), Expect = 8e-15
Identities = 44/129 (34%), Positives = 67/129 (51%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P + ++E I C +D+R+ LYGNIVLSGGSTMF R+ ++
Sbjct: 260 PEVMFQPSLIGME-APGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE 318
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F Q+ ++
Sbjct: 319 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRA 362
Query: 206 AYMEYGPSI 180
Y E GP+I
Sbjct: 363 EYEESGPAI 371
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 77.4 bits (182), Expect = 8e-15
Identities = 44/129 (34%), Positives = 67/129 (51%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P + + ++E I C +D+R+ LYGN+VLSGGSTMF R+ ++
Sbjct: 259 PEVLFQPSLVGME-SPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + V+V++ ++Y+VW GGS+LAS F Q+ +K
Sbjct: 318 IT----------------SLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKG 361
Query: 206 AYMEYGPSI 180
Y E GP I
Sbjct: 362 EYDESGPGI 370
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 73.3 bits (172), Expect = 1e-13
Identities = 43/122 (35%), Positives = 62/122 (50%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P F + ++E I C +D+R+ LYGNIVLSGGSTMF R+ ++
Sbjct: 260 PEVLFQPSFIGME-APGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKE 318
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + ++VV+ ++Y+VW GGS+LAS F QV T
Sbjct: 319 IT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPT 362
Query: 206 AY 201
Y
Sbjct: 363 LY 364
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 63.3 bits (147), Expect = 1e-10
Identities = 41/133 (30%), Positives = 63/133 (47%)
Frame = -1
Query: 572 LGPEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQ 393
L PE+ FHP + L E + IQ+C ++ L+ I+L+GGST+F F RL+
Sbjct: 309 LVPEMLFHPIDLGMN-QAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLE 367
Query: 392 RDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHT 213
++++ V P V++++ W GGS+LA P+F +C T
Sbjct: 368 KELRPLV----------------PDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCIT 411
Query: 212 KQAYMEYGPSICR 174
K Y E G CR
Sbjct: 412 KSEYEEMGSMRCR 424
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/77 (33%), Positives = 43/77 (55%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P F + ++E I C +D+R+ LYGNIVLSGG+TMF R+ ++
Sbjct: 260 PEVLFQPSFVGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKE 318
Query: 386 IKRAVDARLKLSTMLSE 336
I + +K+ +++
Sbjct: 319 ITALAPSSMKIKMWIAK 335
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/102 (27%), Positives = 50/102 (49%)
Frame = -1
Query: 515 LNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSE 336
L MV + + C +D+R+ L +I+LSGGS+ RL++++ ++ + S
Sbjct: 379 LPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASG 438
Query: 335 GRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTK 210
+ +R++VW GGS+LAS F Q+ +K
Sbjct: 439 NSVE-------------RRFSVWIGGSILASLGSFQQMWFSK 467
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 42.7 bits (96), Expect = 2e-04
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = -1
Query: 509 EMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD-IKRAVDARLKLSTMLSEG 333
+M IQ ID R LY +IVLSGGSTM+ RL+++ + R +D LK + +G
Sbjct: 306 DMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGN---KDG 362
Query: 332 RITPKPIDVQVVSHNMQRYAVWFGGSMLA 246
K + +++ +++ V+ GG++LA
Sbjct: 363 L---KKLRLRIEDPPRRKHMVYLGGAVLA 388
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 41.9 bits (94), Expect = 3e-04
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = -1
Query: 563 EIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDI 384
E F P + ++++V V P + R L N +L GG+ F R QR+
Sbjct: 277 EALFQPHILGLEDYGIVHQLVTSVSNVTP-EYHRQLLENTMLCGGTASMTGFEDRFQREA 335
Query: 383 KRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCH-TKQ 207
+ A + + P + + N+ RY+ W GG++LA F Q H TK
Sbjct: 336 NLSASA-------ICPSLVKPP----EYMPENLARYSAWLGGAILAKV-VFPQNQHVTKG 383
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 384 DYDETGPSI 392
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 33.1 bits (72), Expect = 0.16
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = -1
Query: 455 YGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEG-RITPKPIDVQVVSHNMQR 279
Y +VLSGGS+ RL+++++ + A +SEG R+ P P
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAH------ISEGIRVIPPPFGTD-------- 443
Query: 278 YAVWFGGSMLASTPEFYQV-CHTKQAYME 195
+ WFG M+++ F + C K+ + +
Sbjct: 444 -SAWFGAKMISNVSTFTEAWCIKKKQFRQ 471
>04_04_0676 -
27187778-27188316,27188441-27188530,27189249-27189480,
27189569-27189899,27190369-27190591,27190772-27191132
Length = 591
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +3
Query: 126 LILEGCLCHGTKNRVVSANTRTILHVCLFSMADLVELWC*CKHTASEPHSISLHVMR 296
L+L CLC+ TK + T+ H+ F L LW PH ++ + +R
Sbjct: 186 LVLTLCLCYSTKESAMLNMVITVFHLLFFVFIILAGLWNGSARNLVSPHGLAPYGVR 242
>03_05_0725 +
27155736-27155746,27155798-27155949,27156108-27158068,
27159169-27159397,27159506-27159634,27159725-27159838,
27160059-27160258,27160301-27160599,27160713-27160923,
27161017-27161172,27161290-27161447,27161532-27161724,
27162015-27162406,27162537-27162717,27162802-27163031,
27163108-27163753,27163833-27163902,27163994-27164244
Length = 1860
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 123 NLILEGCLCHGTKNRVVSANTRTILHVCLFSMADLVELWC*CKHTASEPHSISLHVMR 296
N + LC T S+NT + + F ++ + L CK A + +I+L +MR
Sbjct: 470 NSVSSNILCDETSECDSSSNTNCVFWIRFFWLSGCLSLSSDCKEKAYKEFNIALSLMR 527
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +3
Query: 135 EGCLCHGTKNRVVSANTRTILHVCLFSMADLVELWC*CKHTASEPHSISLHVMRHNLYI 311
E C T + +V+ T +LH+ ++S+ +C A+ +H +R N Y+
Sbjct: 328 EDCSAEDTFDAIVTCGTSVLLHMHIYSLLS----FCSINTIAAICQEAGMHAVRKNRYV 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,901,366
Number of Sequences: 37544
Number of extensions: 315380
Number of successful extensions: 668
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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