Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F13
(572 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 234 4e-62
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 80 1e-15
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 78 5e-15
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 78 5e-15
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 78 5e-15
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 78 5e-15
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 78 5e-15
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 78 5e-15
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 78 5e-15
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 74 8e-14
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 64 9e-11
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 54 5e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 50 9e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 50 9e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 45 4e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 45 4e-05
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 44 6e-05
AL021487-13|CAA16356.3| 326|Caenorhabditis elegans Hypothetical... 33 0.11
Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical pr... 31 0.77
AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical... 30 1.0
AL021487-6|CAA16361.2| 325|Caenorhabditis elegans Hypothetical ... 30 1.3
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 27 7.2
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 27 7.2
Z47067-1|CAA87328.1| 776|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 234 bits (572), Expect = 4e-62
Identities = 104/139 (74%), Positives = 118/139 (84%)
Frame = -1
Query: 572 LGPEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQ 393
LGPEIFFHPEF N +FT P+++ +D +IQ CPIDVRRGLY NIVLSGGSTMF+DF R+LQ
Sbjct: 284 LGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQ 343
Query: 392 RDIKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHT 213
RD+KR D RL++S LS GR+ PKPIDVQV+SH MQRYAVWFGGSMLAST EFYQV HT
Sbjct: 344 RDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHT 403
Query: 212 KQAYMEYGPSICRHNPVFG 156
K YME GPSICR+NPVFG
Sbjct: 404 KAEYMERGPSICRYNPVFG 422
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 79.8 bits (188), Expect = 1e-15
Identities = 43/129 (33%), Positives = 70/129 (54%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P F + ++E + I C +D+R+ LY N VLSGG++MF R+Q++
Sbjct: 258 PEVLFQPAFIGME-GAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKE 316
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I+ + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 317 IQ----------------HLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 361 EYDESGPSI 369
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEAMFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEAMFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEAMFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 215 PEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 273
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 274 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 317
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 318 EYDESGPSI 326
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 245 PEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 303
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 304 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 347
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 348 EYDESGPSI 356
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/129 (34%), Positives = 68/129 (52%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEALFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I + P + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 IT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 362 EYDESGPSI 370
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 73.7 bits (173), Expect = 8e-14
Identities = 45/129 (34%), Positives = 69/129 (53%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE F P F + + ++E I C ID+R+ LY N VLSGG+TM+ R+Q++
Sbjct: 259 PEAMFQPSFLGME-SAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKE 317
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPEFYQVCHTKQ 207
I T L+ + +++++ ++Y+VW GGS+LAS F Q+ +KQ
Sbjct: 318 I-----------TALA------PTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 206 AYMEYGPSI 180
Y E GPSI
Sbjct: 361 EYDESGPSI 369
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 63.7 bits (148), Expect = 9e-11
Identities = 40/129 (31%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PE+ F P+ ++ + +V++ I C +D+R+ LY NIVLSGG+T+F+ FG RL +
Sbjct: 257 PEVLFKPDLIGTEWP-GMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGE 315
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAV-WFGGSMLASTPEFYQVCHTK 210
+++ A +G+I +S + +R ++ W GGS++AS F ++ K
Sbjct: 316 MRKIAPA---------DGKIR--------ISASQERNSLTWIGGSIVASLDTFRKMWLGK 358
Query: 209 QAYMEYGPS 183
+ Y + G S
Sbjct: 359 KEYEDMGAS 367
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 54.4 bits (125), Expect = 5e-08
Identities = 33/108 (30%), Positives = 59/108 (54%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PEI F P N + L+E++ IQ+ ID R Y +IVLSGG+TM+ RL+++
Sbjct: 262 PEILFQPHLINVE-KAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKE 320
Query: 386 IKRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLAS 243
+K +L L +L + +++ + +++ V+ GG++LA+
Sbjct: 321 LK-----QLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLAN 363
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 50.4 bits (115), Expect = 9e-07
Identities = 30/110 (27%), Positives = 57/110 (51%)
Frame = -1
Query: 563 EIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDI 384
EIFF+ + F + L +++ +++ CPID+R+ L+ NI+L+GG + +RL+++I
Sbjct: 174 EIFFNENLNPTSFDLSLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEI 233
Query: 383 KRAVDARLKLSTMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLASTPE 234
+ +D + S+ + K + N + W G S+L S E
Sbjct: 234 -QVIDEKNN-----SKIAVIVKFYQFSEIK-NTPLFVSWLGASLLGSLRE 276
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 50.4 bits (115), Expect = 9e-07
Identities = 27/90 (30%), Positives = 46/90 (51%)
Frame = -1
Query: 563 EIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRDI 384
E F P+ D T L++++ E I CPID RR LY NI L+GG+++ +L++++
Sbjct: 437 EGLFKPKKWGLD-TKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQEL 495
Query: 383 KRAVDARLKLSTMLSEGRITPKPIDVQVVS 294
V + +S R + Q+V+
Sbjct: 496 STVVPNTIHTQVNISPWRYNAAYLGAQIVA 525
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PEI F+P + D + E V E I CP +R L NI++ GGS+ F F RL+R+
Sbjct: 273 PEILFNPSDIDID-QCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLERE 331
Query: 386 IKRAVDARLKLS 351
++ + A L+
Sbjct: 332 VRSMLPAEYGLN 343
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.8 bits (101), Expect = 4e-05
Identities = 26/72 (36%), Positives = 39/72 (54%)
Frame = -1
Query: 566 PEIFFHPEFSNADFTVPLNEMVDEVIQSCPIDVRRGLYGNIVLSGGSTMFRDFGRRLQRD 387
PEI F+P + D + E V E I CP +R L NI++ GGS+ F F RL+R+
Sbjct: 273 PEILFNPSDIDID-QCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLERE 331
Query: 386 IKRAVDARLKLS 351
++ + A L+
Sbjct: 332 VRSMLPAEYGLN 343
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 44.4 bits (100), Expect = 6e-05
Identities = 29/99 (29%), Positives = 46/99 (46%)
Frame = -1
Query: 476 IDVRRGLYGNIVLSGGSTMFRDFGRRLQRDIKRAVDARLKLSTMLSEGRITPKPIDVQVV 297
ID+R L+ N+ ++GG+++ F RL + +KL R+ P +
Sbjct: 345 IDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKL-------RVFAAPTQAE-- 395
Query: 296 SHNMQRYAVWFGGSMLASTPEFYQVCHTKQAYMEYGPSI 180
++Y W GGS+L S F Q+ +K Y E G SI
Sbjct: 396 ----RKYGAWIGGSILGSLGTFQQMWVSKAEYDESGKSI 430
>AL021487-13|CAA16356.3| 326|Caenorhabditis elegans Hypothetical
protein Y45F10B.5 protein.
Length = 326
Score = 33.5 bits (73), Expect = 0.11
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 145 YVMVPKTGLCLQILGPYSMYACLVWQT 225
+ ++P G C Q+LGPY A +W T
Sbjct: 169 FSLIPAVGTCRQLLGPYQFGAIFIWYT 195
>Z73908-5|CAA98129.2| 325|Caenorhabditis elegans Hypothetical
protein F53B2.4 protein.
Length = 325
Score = 30.7 bits (66), Expect = 0.77
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 145 YVMVPKTGLCLQILGPYSMYACLVWQT 225
+ ++P G C Q+LGPY + +W T
Sbjct: 169 FSLIPALGSCRQLLGPYKFGSIFIWFT 195
>AL021487-12|CAA16358.2| 324|Caenorhabditis elegans Hypothetical
protein Y45F10B.6 protein.
Length = 324
Score = 30.3 bits (65), Expect = 1.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 145 YVMVPKTGLCLQILGPYSMYACLVW 219
+ + P G C Q+LGPY A +W
Sbjct: 169 FSLAPALGFCRQLLGPYQFGAIYIW 193
>AL021487-6|CAA16361.2| 325|Caenorhabditis elegans Hypothetical
protein Y45F10B.11 protein.
Length = 325
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 145 YVMVPKTGLCLQILGPYSMYACLVW 219
+ + P G C QILGPY A W
Sbjct: 169 FTLFPALGFCRQILGPYQFGAIYFW 193
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 453 IQSSSNINGA*LNHFINHLIQRYSEISIXKFRMEENL 563
+ + ING + + +N L Y + I KF++E+ L
Sbjct: 231 VDALEKINGEYIQNLLNDLKSSYVSVQIPKFKIEKEL 267
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 453 IQSSSNINGA*LNHFINHLIQRYSEISIXKFRMEENL 563
+ + ING + + +N L Y + I KF++E+ L
Sbjct: 231 VDALEKINGEYIQNLLNDLKSSYVSVQIPKFKIEKEL 267
>Z47067-1|CAA87328.1| 776|Caenorhabditis elegans Hypothetical
protein C43C3.1 protein.
Length = 776
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 353 STMLSEGRITPKPIDVQVVSHNMQRYAVWFGGSMLAS--TPEFYQV 222
+T+L+EG I V N QR+ W+ G + S T +F Q+
Sbjct: 632 TTLLNEGSIEHSSSSDSVDEDNFQRFTRWYKGRVKISDVTADFVQL 677
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,879,638
Number of Sequences: 27780
Number of extensions: 278537
Number of successful extensions: 700
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -