Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F05
(687 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 30 0.020
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 28 0.062
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 26 0.33
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 26 0.33
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 24 1.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 2.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.3
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 7.2
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 7.2
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 21 9.5
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 29.9 bits (64), Expect = 0.020
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -3
Query: 457 MKGNYILHSEGASFTCVNCNGVFXSIRSLLMHLVHAEHFAYRPPA 323
+K + ++H+ F C C G F L+ H E A R PA
Sbjct: 234 LKAHVLIHTNEKPFECDKCRGRFRRRHHLVHHKCGGEEEAERAPA 278
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 28.3 bits (60), Expect = 0.062
Identities = 20/95 (21%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Frame = -3
Query: 595 LKCVYCNFDFRDNREAVKHALSNVYHQSAVAETKLNA-NKADIISVYMKGNYILHSE--- 428
LKC++C FR E H ++ + +++ ++ + +D G+ +++
Sbjct: 479 LKCMWCGQSFRSLAEMTSHMQQTQHYTNIISQEQIISWRSSDDAKGGGGGSGSGNNQPPG 538
Query: 427 ------GASFTCVNCNGVFXSIRSLLMHLVHAEHF 341
A TC C+ F S++ L H+V H+
Sbjct: 539 GPSSHVSAVLTCKVCDQAFSSLKELSNHMVKNSHY 573
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 412 CVNCNGVFXSIRSLLMHLVHAEHFAYRPP 326
CV C F S+ ++ H+ A+H P
Sbjct: 380 CVWCKQSFPSLAAMTTHMKEAKHCGVNVP 408
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 25.8 bits (54), Expect = 0.33
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 457 MKGNYILHSEGASFTCVNCNGVFXSIRSLLMHL-VHAEHFAYRPPAECTFRY 305
+K + HS + C++CN F +L H+ H+ +R P C R+
Sbjct: 9 LKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV-CDRRF 59
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 25.8 bits (54), Expect = 0.33
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = -3
Query: 457 MKGNYILHSEGASFTCVNCNGVFXSIRSLLMHL-VHAEHFAYRPPAECTFRY 305
+K + HS + C++CN F +L H+ H+ +R P C R+
Sbjct: 265 LKTHLRTHSGEKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV-CDRRF 315
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.2 bits (50), Expect = 1.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 610 NKIEDLKCVYCNFDFRDNREAVKHALSNVYH 518
NK E C YCN F D AV + + YH
Sbjct: 466 NKEEGNSCQYCNIAFGD---AVLYTIHMGYH 493
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 259 YVYYSFGRFKCGV 221
Y+ Y+FG+F C V
Sbjct: 143 YICYAFGKFSCKV 155
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 259 YVYYSFGRFKCGV 221
Y+ Y+FG+F C V
Sbjct: 376 YICYAFGKFSCKV 388
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.3
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 259 YVYYSFGRFKCGV 221
Y+ Y+FG+F C V
Sbjct: 376 YICYAFGKFSCKV 388
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 200 LLDVRVTNATFEPPKRVINVF 262
+L V +TN TF+ VINVF
Sbjct: 449 VLFVFLTNMTFQNVFAVINVF 469
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.4 bits (43), Expect = 7.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 200 LLDVRVTNATFEPPKRVINVF 262
+L V +TN TF+ VINVF
Sbjct: 449 VLFVFLTNMTFQNVFAVINVF 469
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -2
Query: 683 THGDRSQTSPSGREQRSRQTICGT 612
TH QTS S +R+ + CG+
Sbjct: 392 THTSSQQTSDSFLSKRNSEKKCGS 415
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,351
Number of Sequences: 336
Number of extensions: 3190
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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