Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_F02
(699 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2Q5A1 Cluster: Maturase K; n=9; core eudicotyledons|Re... 36 0.72
UniRef50_Q9TKR9 Cluster: Maturase K; n=653; root|Rep: Maturase K... 35 2.2
UniRef50_Q038U4 Cluster: DNA primase; n=1; Lactobacillus casei A... 34 3.9
UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.1
UniRef50_Q8LX75 Cluster: Cytochrome oxidase II; n=1; Chaoborus a... 33 6.7
UniRef50_Q54YK1 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q5W0I9 Cluster: RAB18, member RAS oncogene family; n=12... 33 8.9
UniRef50_Q9NP72 Cluster: Ras-related protein Rab-18; n=53; Eukar... 33 8.9
>UniRef50_A2Q5A1 Cluster: Maturase K; n=9; core eudicotyledons|Rep:
Maturase K - Medicago truncatula (Barrel medic)
Length = 481
Score = 36.3 bits (80), Expect = 0.72
Identities = 24/108 (22%), Positives = 53/108 (49%)
Frame = +1
Query: 142 YSNNXFSQMILNAYKELKKLPVV*WLLFLILEP*MKAMLFLFHVKNLRFSLTTTNSLYFY 321
Y+NN +SQ+I + + ++P FL L ++ + KNLR S+ +
Sbjct: 85 YNNNFYSQIISEGFAIVGEIP-----FFLELSSSLEEAEIIKSYKNLR-SIHSIFPFLED 138
Query: 322 KFPVMTFTKSLKLQYSWHNQFIIRRIKLCSFIRTLPHFKILYNFIFHF 465
KF + +++ Y H + +++ ++ +++ P F +L F+++F
Sbjct: 139 KFTYFNYVSDIRIPYPIHLEILVQILRY--WVKDAPFFHLLRLFLYNF 184
>UniRef50_Q9TKR9 Cluster: Maturase K; n=653; root|Rep: Maturase K -
Austrosteenisia blackii (Blood vine)
Length = 506
Score = 34.7 bits (76), Expect = 2.2
Identities = 23/108 (21%), Positives = 54/108 (50%)
Frame = +1
Query: 142 YSNNXFSQMILNAYKELKKLPVV*WLLFLILEP*MKAMLFLFHVKNLRFSLTTTNSLYFY 321
Y+NN +SQ+I + + ++P FL ++ + + KNLR S+ + L+
Sbjct: 85 YNNNFYSQIISEGFVIVVEIP-----FFLQFSSSLEETKIVKYYKNLR-SIHSIFPLFED 138
Query: 322 KFPVMTFTKSLKLQYSWHNQFIIRRIKLCSFIRTLPHFKILYNFIFHF 465
KF + +++ Y H + +++ ++ +I+ +P +L F +++
Sbjct: 139 KFTYLNHESDIRIPYPIHLEILVQILRY--WIKDVPFLHLLRLFFYYY 184
>UniRef50_Q038U4 Cluster: DNA primase; n=1; Lactobacillus casei ATCC
334|Rep: DNA primase - Lactobacillus casei (strain ATCC
334)
Length = 595
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 328 PVMTFTKSLK--LQYSWHNQFIIRRIKLCSFIRTLPHFKILYNFIFHFI 468
P+ +T + + L Y WH+ +++R+K +F +PHF+ L+ F+
Sbjct: 454 PIDRYTAAQRQLLYYVWHDDLVMQRLKNTAFTFPVPHFQTLFTGWLDFL 502
>UniRef50_Q3LWC6 Cluster: Putative uncharacterized protein; n=1;
Bigelowiella natans|Rep: Putative uncharacterized
protein - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 160
Score = 33.5 bits (73), Expect = 5.1
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 262 LFHVKNLRFSLTTTNSLYFYKFPVMTFTKSLKLQYSWHNQFIIRRIKL-CSFIRTLPHFK 438
L+ VK L F LTT + F F LK++++ ++QF+I KL SF + K
Sbjct: 75 LYIVKRLYF-LTTIQLIIFRVKYYYIFKNELKIKHNQYHQFLINHRKLYASFFNVILIVK 133
Query: 439 ILYNFIFHF 465
FIF F
Sbjct: 134 TFLMFIFLF 142
>UniRef50_Q8LX75 Cluster: Cytochrome oxidase II; n=1; Chaoborus
americanus|Rep: Cytochrome oxidase II - Chaoborus
americanus
Length = 96
Score = 33.1 bits (72), Expect = 6.7
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 431 TLKFFIILFFISYNHK*VFKKITSSLYLIMLIT 529
T+KFF +FI++N+ F +TS LY ++IT
Sbjct: 59 TIKFFPWSYFINFNNNYYFSLVTSLLYYFLMIT 91
>UniRef50_Q54YK1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 192
Score = 32.7 bits (71), Expect = 8.9
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +1
Query: 217 LLFLILEP*MKAMLFLFHVKNLRFSLTTTNSLYFYKFPVMTFTKSLKLQYSWHNQFIIRR 396
L+F+ + +L LF KN+ F +F+KFP+ TK +K +S+ F R
Sbjct: 87 LIFIFSLSSIYLLLLLFFFKNILFFF-----FFFFKFPIKKSTKYIKKIFSY---FYTRT 138
Query: 397 IKLCSF-IRTLPHFKILYN-FIFHFI 468
I L + + L K YN FIF+FI
Sbjct: 139 IFLFFYLLLRLYGEKNSYNFFIFYFI 164
>UniRef50_Q5W0I9 Cluster: RAB18, member RAS oncogene family; n=12;
Eumetazoa|Rep: RAB18, member RAS oncogene family - Homo
sapiens (Human)
Length = 290
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -2
Query: 395 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 234
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 209 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 263
>UniRef50_Q9NP72 Cluster: Ras-related protein Rab-18; n=53;
Eukaryota|Rep: Ras-related protein Rab-18 - Homo sapiens
(Human)
Length = 206
Score = 32.7 bits (71), Expect = 8.9
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -2
Query: 395 LRIINWL--CHEYCSFKDFVNVITGN-L*KYNELVVVSENLKFLTWNKKSIAFIYGS 234
+++ NWL YC+ D VN++ GN + K N V +E LKF K S+ FI S
Sbjct: 97 VKLDNWLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFA--RKHSMLFIEAS 151
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,516,540
Number of Sequences: 1657284
Number of extensions: 9789484
Number of successful extensions: 20321
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20312
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55371905986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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