Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_E14
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.0  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   7.0  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    21   7.0  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    21   7.0  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   9.2  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   9.2  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   9.2  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   9.2  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 134 DVGHTISIIFHYLLRINHDSWIL 66
           D+  T + I +YLL  N+  W L
Sbjct: 187 DMKKTYNNIDYYLLAANYTGWYL 209


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 134 DVGHTISIIFHYLLRINHDSWIL 66
           D+  T + I +YLL  N+  W L
Sbjct: 187 DMKKTYNNIDYYLLAANYTGWYL 209


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 196 LVNQIMLFNNSHNVYKMQYWYYN 264
           L N+ +  NN++N Y  +  YYN
Sbjct: 307 LSNKTIHNNNNYNNYNNKKLYYN 329


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 99  IVEDDANCVSHIH*STARGDDVKK 170
           + ED A C+S    + A+ DDV K
Sbjct: 38  VAEDKARCMSEHGTTQAQIDDVDK 61


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 99  IVEDDANCVSHIH*STARGDDVKK 170
           + ED A C+S    + A+ DDV K
Sbjct: 38  VAEDKARCMSEHGTTQAQIDDVDK 61


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LFNNSHNVYKMQYWYYN 264
           + NN++N  K+QY+  N
Sbjct: 90  IHNNNNNYKKLQYYNIN 106


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LFNNSHNVYKMQYWYYN 264
           + NN++N  K+QY+  N
Sbjct: 90  IHNNNNNYKKLQYYNIN 106


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LFNNSHNVYKMQYWYYN 264
           + NN++N  K+QY+  N
Sbjct: 90  IHNNNNNYKKLQYYNIN 106


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LFNNSHNVYKMQYWYYN 264
           + NN++N  K+QY+  N
Sbjct: 90  IHNNNNNYKKLQYYNIN 106


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 214 LFNNSHNVYKMQYWYYN 264
           + NN++N  K+QY+  N
Sbjct: 323 IHNNNNNYKKLQYYNIN 339


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,019
Number of Sequences: 438
Number of extensions: 3235
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)