Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_E09
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92803-6|CAB07240.1|  215|Caenorhabditis elegans Hypothetical pr...    86   2e-17
U66216-1|AAB07465.1|  128|Caenorhabditis elegans RAN/Tc4 protein.      66   2e-11
AC024839-9|AAY86283.1|   89|Caenorhabditis elegans Hypothetical ...    28   5.4  
AC024839-6|AAY86284.1|   89|Caenorhabditis elegans Hypothetical ...    28   5.4  
U40941-8|AAX55693.1|  260|Caenorhabditis elegans Hypothetical pr...    28   7.1  
U40941-9|AAX55692.1|  294|Caenorhabditis elegans Hypothetical pr...    27   9.4  

>Z92803-6|CAB07240.1|  215|Caenorhabditis elegans Hypothetical
           protein K01G5.4 protein.
          Length = 215

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 39/58 (67%), Positives = 45/58 (77%)
 Frame = -2

Query: 684 KPFLWLARKLIGDGNLEFVAMPALLPPEVTMDPQWQNQIEKDLQDAQNTALPEEDEDL 511
           KPFLWLARKL+GD NLEFVAMPAL PPEV MDP    + EKDL +A    LP++D+DL
Sbjct: 158 KPFLWLARKLLGDPNLEFVAMPALAPPEVQMDPAMIAEYEKDLDNAAKADLPDDDDDL 215


>U66216-1|AAB07465.1|  128|Caenorhabditis elegans RAN/Tc4 protein.
          Length = 128

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = -2

Query: 684 KPFLWLARKLIGDGNLEFVAMPALLPPEVTMDP 586
           KPFLWLARKL+GD NLEFVAMPAL PPEV MDP
Sbjct: 92  KPFLWLARKLLGDPNLEFVAMPALAPPEVQMDP 124


>AC024839-9|AAY86283.1|   89|Caenorhabditis elegans Hypothetical
           protein Y59E9AR.10 protein.
          Length = 89

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +1

Query: 79  IIILCVYM--LXVYKELSYKFVYMCIINNSD 165
           ++++ VY+  L  Y  L+YKF+Y C+ ++++
Sbjct: 5   LVVVVVYLNALGYYAVLAYKFIYFCVQHDAN 35


>AC024839-6|AAY86284.1|   89|Caenorhabditis elegans Hypothetical
           protein Y59E9AR.9 protein.
          Length = 89

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/31 (32%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = +1

Query: 79  IIILCVYM--LXVYKELSYKFVYMCIINNSD 165
           ++++ VY+  L  Y  L+YKF+Y C+ ++++
Sbjct: 5   LVVVVVYLNALGYYAVLAYKFIYFCVQHDAN 35


>U40941-8|AAX55693.1|  260|Caenorhabditis elegans Hypothetical
           protein F35C8.2 protein.
          Length = 260

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -1

Query: 523 R*RLINMINGCTQCPF 476
           R R +N+INGC  CPF
Sbjct: 98  RLREVNVINGCAPCPF 113


>U40941-9|AAX55692.1|  294|Caenorhabditis elegans Hypothetical
           protein F35C8.1 protein.
          Length = 294

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 517 RLINMINGCTQCPF 476
           R +N+INGC  CPF
Sbjct: 101 REVNVINGCAPCPF 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,714,366
Number of Sequences: 27780
Number of extensions: 343289
Number of successful extensions: 907
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)